Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trex1Q91XB0 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.17□□□□□ -0.14
Trex1Q91XB0 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trex1Q91XB0 Gm6580-201ENSMUST00000117504 1357 ntBASIC14.17□□□□□ -0.14
Trex1Q91XB0 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trex1Q91XB0 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trex1Q91XB0 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.17□□□□□ -0.14
Trex1Q91XB0 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trex1Q91XB0 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trex1Q91XB0 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trex1Q91XB0 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.16□□□□□ -0.14
Trex1Q91XB0 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trex1Q91XB0 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trex1Q91XB0 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trex1Q91XB0 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trex1Q91XB0 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trex1Q91XB0 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trex1Q91XB0 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trex1Q91XB0 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trex1Q91XB0 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trex1Q91XB0 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trex1Q91XB0 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trex1Q91XB0 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC14.16□□□□□ -0.14
Trex1Q91XB0 Gm7851-201ENSMUST00000117574 323 ntBASIC14.16□□□□□ -0.14
Trex1Q91XB0 Gm11941-201ENSMUST00000119904 610 ntBASIC14.16□□□□□ -0.14
Trex1Q91XB0 Gm15432-201ENSMUST00000121106 195 ntBASIC14.16□□□□□ -0.14
Trex1Q91XB0 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.16□□□□□ -0.14
Trex1Q91XB0 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC14.16□□□□□ -0.14
Trex1Q91XB0 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trex1Q91XB0 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC14.16□□□□□ -0.14
Trex1Q91XB0 Gm3332-201ENSMUST00000189337 928 ntBASIC14.16□□□□□ -0.14
Trex1Q91XB0 Gm37246-201ENSMUST00000192665 835 ntBASIC14.16□□□□□ -0.14
Trex1Q91XB0 Gm807-202ENSMUST00000224929 408 ntBASIC14.16□□□□□ -0.14
Trex1Q91XB0 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trex1Q91XB0 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trex1Q91XB0 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trex1Q91XB0 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trex1Q91XB0 Gm26448-201ENSMUST00000082446 203 ntBASIC14.16□□□□□ -0.14
Trex1Q91XB0 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trex1Q91XB0 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trex1Q91XB0 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trex1Q91XB0 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trex1Q91XB0 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trex1Q91XB0 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trex1Q91XB0 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trex1Q91XB0 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trex1Q91XB0 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trex1Q91XB0 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Trex1Q91XB0 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trex1Q91XB0 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trex1Q91XB0 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.15□□□□□ -0.14
Trex1Q91XB0 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trex1Q91XB0 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trex1Q91XB0 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trex1Q91XB0 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trex1Q91XB0 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trex1Q91XB0 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trex1Q91XB0 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trex1Q91XB0 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trex1Q91XB0 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trex1Q91XB0 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC14.15□□□□□ -0.14
Trex1Q91XB0 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC14.15□□□□□ -0.14
Trex1Q91XB0 Gm10051-201ENSMUST00000145209 414 ntBASIC14.15□□□□□ -0.14
Trex1Q91XB0 Gm7467-201ENSMUST00000185173 652 ntBASIC14.15□□□□□ -0.14
Trex1Q91XB0 Gm5733-201ENSMUST00000190232 939 ntBASIC14.15□□□□□ -0.14
Trex1Q91XB0 Gm43184-201ENSMUST00000197247 542 ntBASIC14.15□□□□□ -0.14
Trex1Q91XB0 Gm42682-201ENSMUST00000198349 1265 ntBASIC14.15□□□□□ -0.14
Trex1Q91XB0 Gm4482-201ENSMUST00000200876 742 ntBASIC14.15□□□□□ -0.14
Trex1Q91XB0 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trex1Q91XB0 Gm10109-202ENSMUST00000206890 1211 ntBASIC14.15□□□□□ -0.14
Trex1Q91XB0 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trex1Q91XB0 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC14.15□□□□□ -0.14
Trex1Q91XB0 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trex1Q91XB0 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trex1Q91XB0 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trex1Q91XB0 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trex1Q91XB0 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trex1Q91XB0 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trex1Q91XB0 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trex1Q91XB0 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trex1Q91XB0 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.15□□□□□ -0.14
Trex1Q91XB0 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trex1Q91XB0 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trex1Q91XB0 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trex1Q91XB0 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trex1Q91XB0 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.14□□□□□ -0.15
Trex1Q91XB0 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trex1Q91XB0 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trex1Q91XB0 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Trex1Q91XB0 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.14□□□□□ -0.15
Trex1Q91XB0 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trex1Q91XB0 Gm11509-201ENSMUST00000117358 325 ntBASIC14.14□□□□□ -0.15
Trex1Q91XB0 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trex1Q91XB0 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trex1Q91XB0 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trex1Q91XB0 Gm3508-201ENSMUST00000186012 792 ntBASIC14.14□□□□□ -0.15
Trex1Q91XB0 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trex1Q91XB0 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trex1Q91XB0 CT009713.8-201ENSMUST00000225448 560 ntBASIC14.14□□□□□ -0.15
Trex1Q91XB0 Gm1821-202ENSMUST00000227415 750 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms