Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trim60Q8VI40 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim60Q8VI40 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim60Q8VI40 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim60Q8VI40 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim60Q8VI40 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim60Q8VI40 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim60Q8VI40 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim60Q8VI40 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim60Q8VI40 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim60Q8VI40 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim60Q8VI40 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
Trim60Q8VI40 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trim60Q8VI40 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim60Q8VI40 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Trim60Q8VI40 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim60Q8VI40 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim60Q8VI40 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim60Q8VI40 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim60Q8VI40 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Trim60Q8VI40 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim60Q8VI40 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim60Q8VI40 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim60Q8VI40 Gm27243-201ENSMUST00000183964 521 ntBASIC12.81□□□□□ -0.36
Trim60Q8VI40 Gm9794-201ENSMUST00000202370 423 ntBASIC12.81□□□□□ -0.36
Trim60Q8VI40 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.81□□□□□ -0.36
Trim60Q8VI40 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.81□□□□□ -0.36
Trim60Q8VI40 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim60Q8VI40 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim60Q8VI40 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim60Q8VI40 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim60Q8VI40 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim60Q8VI40 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trim60Q8VI40 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim60Q8VI40 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trim60Q8VI40 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.81□□□□□ -0.36
Trim60Q8VI40 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim60Q8VI40 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.81□□□□□ -0.36
Trim60Q8VI40 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim60Q8VI40 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim60Q8VI40 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim60Q8VI40 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim60Q8VI40 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim60Q8VI40 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim60Q8VI40 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim60Q8VI40 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim60Q8VI40 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim60Q8VI40 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim60Q8VI40 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim60Q8VI40 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim60Q8VI40 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim60Q8VI40 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
Trim60Q8VI40 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim60Q8VI40 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.8□□□□□ -0.36
Trim60Q8VI40 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim60Q8VI40 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim60Q8VI40 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
Trim60Q8VI40 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim60Q8VI40 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim60Q8VI40 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim60Q8VI40 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim60Q8VI40 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim60Q8VI40 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.8□□□□□ -0.36
Trim60Q8VI40 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim60Q8VI40 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim60Q8VI40 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim60Q8VI40 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim60Q8VI40 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim60Q8VI40 Gm9022-201ENSMUST00000182482 992 ntBASIC12.8□□□□□ -0.36
Trim60Q8VI40 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.8□□□□□ -0.36
Trim60Q8VI40 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim60Q8VI40 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.8□□□□□ -0.36
Trim60Q8VI40 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.8□□□□□ -0.36
Trim60Q8VI40 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Trim60Q8VI40 Gm7653-201ENSMUST00000214567 508 ntBASIC12.8□□□□□ -0.36
Trim60Q8VI40 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim60Q8VI40 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim60Q8VI40 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim60Q8VI40 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim60Q8VI40 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim60Q8VI40 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Trim60Q8VI40 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.8□□□□□ -0.36
Trim60Q8VI40 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim60Q8VI40 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim60Q8VI40 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim60Q8VI40 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim60Q8VI40 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim60Q8VI40 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim60Q8VI40 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim60Q8VI40 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim60Q8VI40 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim60Q8VI40 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim60Q8VI40 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.8□□□□□ -0.36
Trim60Q8VI40 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim60Q8VI40 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim60Q8VI40 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim60Q8VI40 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim60Q8VI40 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms