Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa1Q8VEE4 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Rpa1Q8VEE4 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa1Q8VEE4 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa1Q8VEE4 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa1Q8VEE4 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa1Q8VEE4 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Rpa1Q8VEE4 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Rpa1Q8VEE4 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa1Q8VEE4 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa1Q8VEE4 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa1Q8VEE4 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa1Q8VEE4 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa1Q8VEE4 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.54□□□□□ -0.4
Rpa1Q8VEE4 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa1Q8VEE4 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa1Q8VEE4 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa1Q8VEE4 Gm28760-201ENSMUST00000185995 736 ntBASIC12.54□□□□□ -0.4
Rpa1Q8VEE4 Itm2b-204ENSMUST00000228637 783 ntBASIC12.54□□□□□ -0.4
Rpa1Q8VEE4 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa1Q8VEE4 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.54□□□□□ -0.4
Rpa1Q8VEE4 Gm37785-201ENSMUST00000195783 2408 ntBASIC12.54□□□□□ -0.4
Rpa1Q8VEE4 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa1Q8VEE4 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa1Q8VEE4 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa1Q8VEE4 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Rpa1Q8VEE4 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa1Q8VEE4 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.54□□□□□ -0.4
Rpa1Q8VEE4 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Rpa1Q8VEE4 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa1Q8VEE4 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa1Q8VEE4 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.54□□□□□ -0.4
Rpa1Q8VEE4 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa1Q8VEE4 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
Rpa1Q8VEE4 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rpa1Q8VEE4 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rpa1Q8VEE4 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rpa1Q8VEE4 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rpa1Q8VEE4 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rpa1Q8VEE4 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa1Q8VEE4 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.52□□□□□ -0.41
Rpa1Q8VEE4 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa1Q8VEE4 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa1Q8VEE4 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa1Q8VEE4 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Rpa1Q8VEE4 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Rpa1Q8VEE4 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Rpa1Q8VEE4 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.52□□□□□ -0.41
Rpa1Q8VEE4 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Rpa1Q8VEE4 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.52□□□□□ -0.41
Rpa1Q8VEE4 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.52□□□□□ -0.41
Rpa1Q8VEE4 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa1Q8VEE4 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.52□□□□□ -0.41
Rpa1Q8VEE4 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa1Q8VEE4 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.52□□□□□ -0.41
Rpa1Q8VEE4 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa1Q8VEE4 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa1Q8VEE4 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa1Q8VEE4 Syt7-204ENSMUST00000223586 1344 ntBASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms