Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.91□□□□□ -0.5
Lsm1Q8VC85 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm1Q8VC85 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm1Q8VC85 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm1Q8VC85 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm1Q8VC85 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm1Q8VC85 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Lsm1Q8VC85 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm1Q8VC85 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm1Q8VC85 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm1Q8VC85 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm1Q8VC85 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm1Q8VC85 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm1Q8VC85 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm1Q8VC85 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm1Q8VC85 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm1Q8VC85 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Lsm1Q8VC85 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Gm23119-201ENSMUST00000158610 140 ntBASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Gm35960-201ENSMUST00000202712 767 ntBASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Lsm1Q8VC85 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Lsm1Q8VC85 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Lsm1Q8VC85 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Gm18304-201ENSMUST00000189162 546 ntBASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm1Q8VC85 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm1Q8VC85 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.88□□□□□ -0.51
Lsm1Q8VC85 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm1Q8VC85 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm1Q8VC85 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm1Q8VC85 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm1Q8VC85 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Lsm1Q8VC85 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm1Q8VC85 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm1Q8VC85 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms