Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.91□□□□□ -0.5
Lsm1Q8VC85 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm1Q8VC85 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm1Q8VC85 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm1Q8VC85 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm1Q8VC85 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm1Q8VC85 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Lsm1Q8VC85 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm1Q8VC85 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm1Q8VC85 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm1Q8VC85 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm1Q8VC85 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm1Q8VC85 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm1Q8VC85 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm1Q8VC85 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm1Q8VC85 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm1Q8VC85 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Lsm1Q8VC85 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Gm23119-201ENSMUST00000158610 140 ntBASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Gm35960-201ENSMUST00000202712 767 ntBASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm1Q8VC85 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Lsm1Q8VC85 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Lsm1Q8VC85 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Lsm1Q8VC85 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Gm18304-201ENSMUST00000189162 546 ntBASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm1Q8VC85 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm1Q8VC85 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm1Q8VC85 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.88□□□□□ -0.51
Lsm1Q8VC85 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm1Q8VC85 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm1Q8VC85 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm1Q8VC85 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm1Q8VC85 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Lsm1Q8VC85 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm1Q8VC85 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm1Q8VC85 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms