Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H2afjQ8R1M2 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.53□□□□□ -0.56
H2afjQ8R1M2 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
H2afjQ8R1M2 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
H2afjQ8R1M2 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
H2afjQ8R1M2 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.52□□□□□ -0.56
H2afjQ8R1M2 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
H2afjQ8R1M2 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.52□□□□□ -0.56
H2afjQ8R1M2 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
H2afjQ8R1M2 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
H2afjQ8R1M2 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
H2afjQ8R1M2 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H2afjQ8R1M2 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H2afjQ8R1M2 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H2afjQ8R1M2 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H2afjQ8R1M2 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
H2afjQ8R1M2 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
H2afjQ8R1M2 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
H2afjQ8R1M2 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.52□□□□□ -0.57
H2afjQ8R1M2 Gm11478-201ENSMUST00000117851 599 ntBASIC11.52□□□□□ -0.57
H2afjQ8R1M2 Gm14704-201ENSMUST00000120300 874 ntBASIC11.52□□□□□ -0.57
H2afjQ8R1M2 Gm16479-201ENSMUST00000121706 932 ntBASIC11.52□□□□□ -0.57
H2afjQ8R1M2 Gm35960-201ENSMUST00000202712 767 ntBASIC11.52□□□□□ -0.57
H2afjQ8R1M2 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.52□□□□□ -0.57
H2afjQ8R1M2 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
H2afjQ8R1M2 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.52□□□□□ -0.57
H2afjQ8R1M2 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H2afjQ8R1M2 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
H2afjQ8R1M2 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
H2afjQ8R1M2 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
H2afjQ8R1M2 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H2afjQ8R1M2 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H2afjQ8R1M2 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H2afjQ8R1M2 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.52□□□□□ -0.57
H2afjQ8R1M2 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H2afjQ8R1M2 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H2afjQ8R1M2 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H2afjQ8R1M2 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H2afjQ8R1M2 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H2afjQ8R1M2 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
H2afjQ8R1M2 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H2afjQ8R1M2 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H2afjQ8R1M2 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H2afjQ8R1M2 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H2afjQ8R1M2 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
H2afjQ8R1M2 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.52□□□□□ -0.57
H2afjQ8R1M2 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
H2afjQ8R1M2 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
H2afjQ8R1M2 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.52□□□□□ -0.57
H2afjQ8R1M2 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
H2afjQ8R1M2 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.52□□□□□ -0.57
H2afjQ8R1M2 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Gm12138-201ENSMUST00000122180 951 ntBASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Gm22331-201ENSMUST00000158066 136 ntBASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Gm8652-201ENSMUST00000181363 964 ntBASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Gm27847-201ENSMUST00000183711 107 ntBASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Gm27375-201ENSMUST00000183799 107 ntBASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Gm10012-201ENSMUST00000078252 192 ntBASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afjQ8R1M2 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms