Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx54Q8K4L0 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx54Q8K4L0 Gm3017-201ENSMUST00000203603 1126 ntBASIC16.13■□□□□ 0.17
Ddx54Q8K4L0 Gm8956-201ENSMUST00000203939 825 ntBASIC16.13■□□□□ 0.17
Ddx54Q8K4L0 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx54Q8K4L0 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC16.13■□□□□ 0.17
Ddx54Q8K4L0 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx54Q8K4L0 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx54Q8K4L0 Gm5805-201ENSMUST00000072779 456 ntBASIC16.13■□□□□ 0.17
Ddx54Q8K4L0 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx54Q8K4L0 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC16.13■□□□□ 0.17
Ddx54Q8K4L0 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx54Q8K4L0 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx54Q8K4L0 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ddx54Q8K4L0 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx54Q8K4L0 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Ddx54Q8K4L0 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx54Q8K4L0 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx54Q8K4L0 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx54Q8K4L0 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx54Q8K4L0 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx54Q8K4L0 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx54Q8K4L0 Gm6903-201ENSMUST00000160509 1366 ntBASIC16.13■□□□□ 0.17
Ddx54Q8K4L0 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx54Q8K4L0 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC16.12■□□□□ 0.17
Ddx54Q8K4L0 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx54Q8K4L0 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx54Q8K4L0 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx54Q8K4L0 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx54Q8K4L0 Retreg1-206ENSMUST00000228306 1430 ntBASIC16.12■□□□□ 0.17
Ddx54Q8K4L0 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ddx54Q8K4L0 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx54Q8K4L0 Gm43677-201ENSMUST00000198098 2378 ntBASIC16.12■□□□□ 0.17
Ddx54Q8K4L0 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx54Q8K4L0 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx54Q8K4L0 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ddx54Q8K4L0 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC16.12■□□□□ 0.17
Ddx54Q8K4L0 Gm11979-201ENSMUST00000119629 743 ntBASIC16.12■□□□□ 0.17
Ddx54Q8K4L0 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC16.12■□□□□ 0.17
Ddx54Q8K4L0 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC16.12■□□□□ 0.17
Ddx54Q8K4L0 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx54Q8K4L0 Mir6407-201ENSMUST00000184510 101 ntBASIC16.12■□□□□ 0.17
Ddx54Q8K4L0 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx54Q8K4L0 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC16.12■□□□□ 0.17
Ddx54Q8K4L0 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC16.12■□□□□ 0.17
Ddx54Q8K4L0 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC16.12■□□□□ 0.17
Ddx54Q8K4L0 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx54Q8K4L0 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ddx54Q8K4L0 Gm23680-201ENSMUST00000083162 164 ntBASIC16.12■□□□□ 0.17
Ddx54Q8K4L0 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx54Q8K4L0 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx54Q8K4L0 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx54Q8K4L0 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx54Q8K4L0 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx54Q8K4L0 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Ddx54Q8K4L0 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx54Q8K4L0 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx54Q8K4L0 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ddx54Q8K4L0 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx54Q8K4L0 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Gm13910-201ENSMUST00000121752 1428 ntBASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Gm12626-201ENSMUST00000117339 1983 ntBASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Gm14274-201ENSMUST00000117182 615 ntBASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Gm12218-201ENSMUST00000117666 399 ntBASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Gm8815-201ENSMUST00000173809 620 ntBASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Gm26989-201ENSMUST00000182608 749 ntBASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Gm43752-201ENSMUST00000198475 697 ntBASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Gm18460-201ENSMUST00000208088 464 ntBASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Gm45410-201ENSMUST00000211331 1093 ntBASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 AC168279.1-201ENSMUST00000214611 382 ntBASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 AC124433.1-201ENSMUST00000224483 1063 ntBASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Gm5639-201ENSMUST00000122305 2403 ntBASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms