Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cystm1Q8K353 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Cystm1Q8K353 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cystm1Q8K353 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC7.81□□□□□ -1.16
Cystm1Q8K353 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC7.81□□□□□ -1.16
Cystm1Q8K353 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cystm1Q8K353 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cystm1Q8K353 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC7.81□□□□□ -1.16
Cystm1Q8K353 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Cystm1Q8K353 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cystm1Q8K353 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC7.81□□□□□ -1.16
Cystm1Q8K353 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cystm1Q8K353 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cystm1Q8K353 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC7.81□□□□□ -1.16
Cystm1Q8K353 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Cystm1Q8K353 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cystm1Q8K353 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cystm1Q8K353 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Gm15163-201ENSMUST00000120749 1302 ntBASIC7.8□□□□□ -1.16
Cystm1Q8K353 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Gm37422-201ENSMUST00000193794 4718 ntBASIC7.8□□□□□ -1.16
Cystm1Q8K353 AC114543.1-201ENSMUST00000226451 1558 ntBASIC7.8□□□□□ -1.16
Cystm1Q8K353 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC7.8□□□□□ -1.16
Cystm1Q8K353 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Mup-ps23-201ENSMUST00000118063 630 ntBASIC7.8□□□□□ -1.16
Cystm1Q8K353 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Gm12341-201ENSMUST00000119724 503 ntBASIC7.8□□□□□ -1.16
Cystm1Q8K353 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Cystm1Q8K353 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC7.8□□□□□ -1.16
Cystm1Q8K353 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Gm18307-201ENSMUST00000206864 949 ntBASIC7.8□□□□□ -1.16
Cystm1Q8K353 AC238811.3-201ENSMUST00000225422 709 ntBASIC7.8□□□□□ -1.16
Cystm1Q8K353 AC155252.1-201ENSMUST00000226462 1208 ntBASIC7.8□□□□□ -1.16
Cystm1Q8K353 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cystm1Q8K353 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Cystm1Q8K353 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Cystm1Q8K353 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Cystm1Q8K353 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Cystm1Q8K353 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Cystm1Q8K353 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Cystm1Q8K353 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC7.79□□□□□ -1.16
Cystm1Q8K353 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Cystm1Q8K353 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Cystm1Q8K353 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC7.79□□□□□ -1.16
Cystm1Q8K353 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Cystm1Q8K353 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC7.79□□□□□ -1.16
Cystm1Q8K353 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC7.79□□□□□ -1.16
Cystm1Q8K353 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC7.79□□□□□ -1.16
Cystm1Q8K353 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC7.79□□□□□ -1.16
Cystm1Q8K353 Gm3809-201ENSMUST00000180973 1006 ntBASIC7.79□□□□□ -1.16
Cystm1Q8K353 Mir7221-201ENSMUST00000184009 72 ntBASIC7.79□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms