Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne4Q8CII8 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.99□□□□□ -0.17
Syne4Q8CII8 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Syne4Q8CII8 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne4Q8CII8 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne4Q8CII8 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne4Q8CII8 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne4Q8CII8 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne4Q8CII8 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Syne4Q8CII8 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne4Q8CII8 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne4Q8CII8 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne4Q8CII8 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne4Q8CII8 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Syne4Q8CII8 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne4Q8CII8 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne4Q8CII8 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne4Q8CII8 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.98□□□□□ -0.17
Syne4Q8CII8 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne4Q8CII8 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne4Q8CII8 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne4Q8CII8 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.98□□□□□ -0.17
Syne4Q8CII8 Gm11340-201ENSMUST00000119226 412 ntBASIC13.98□□□□□ -0.17
Syne4Q8CII8 Mir1901-201ENSMUST00000122616 78 ntBASIC13.98□□□□□ -0.17
Syne4Q8CII8 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Syne4Q8CII8 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.98□□□□□ -0.17
Syne4Q8CII8 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Syne4Q8CII8 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Syne4Q8CII8 Gm5852-201ENSMUST00000194119 1021 ntBASIC13.98□□□□□ -0.17
Syne4Q8CII8 Gm5542-201ENSMUST00000195485 1089 ntBASIC13.98□□□□□ -0.17
Syne4Q8CII8 Gm18893-201ENSMUST00000198416 943 ntBASIC13.98□□□□□ -0.17
Syne4Q8CII8 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Syne4Q8CII8 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC13.98□□□□□ -0.17
Syne4Q8CII8 AC174797.2-202ENSMUST00000225729 568 ntBASIC13.98□□□□□ -0.17
Syne4Q8CII8 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne4Q8CII8 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne4Q8CII8 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Syne4Q8CII8 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Syne4Q8CII8 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne4Q8CII8 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Syne4Q8CII8 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Syne4Q8CII8 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne4Q8CII8 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne4Q8CII8 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne4Q8CII8 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Syne4Q8CII8 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne4Q8CII8 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Syne4Q8CII8 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syne4Q8CII8 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syne4Q8CII8 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Syne4Q8CII8 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.97□□□□□ -0.17
Syne4Q8CII8 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Syne4Q8CII8 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syne4Q8CII8 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syne4Q8CII8 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Syne4Q8CII8 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Syne4Q8CII8 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Syne4Q8CII8 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syne4Q8CII8 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syne4Q8CII8 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Syne4Q8CII8 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syne4Q8CII8 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syne4Q8CII8 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Syne4Q8CII8 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syne4Q8CII8 Gm12516-201ENSMUST00000120819 385 ntBASIC13.97□□□□□ -0.17
Syne4Q8CII8 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Syne4Q8CII8 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Syne4Q8CII8 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC13.97□□□□□ -0.17
Syne4Q8CII8 AC124457.1-201ENSMUST00000198845 120 ntBASIC13.97□□□□□ -0.17
Syne4Q8CII8 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Syne4Q8CII8 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.97□□□□□ -0.17
Syne4Q8CII8 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.97□□□□□ -0.17
Syne4Q8CII8 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Syne4Q8CII8 AC158355.1-201ENSMUST00000215895 1705 ntBASIC13.97□□□□□ -0.17
Syne4Q8CII8 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Syne4Q8CII8 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Syne4Q8CII8 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Syne4Q8CII8 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syne4Q8CII8 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13.97□□□□□ -0.17
Syne4Q8CII8 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.97□□□□□ -0.17
Syne4Q8CII8 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Syne4Q8CII8 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Syne4Q8CII8 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syne4Q8CII8 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syne4Q8CII8 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Syne4Q8CII8 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Syne4Q8CII8 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Syne4Q8CII8 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Syne4Q8CII8 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Syne4Q8CII8 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Syne4Q8CII8 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Syne4Q8CII8 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Syne4Q8CII8 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Syne4Q8CII8 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Syne4Q8CII8 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Syne4Q8CII8 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Syne4Q8CII8 Gm11451-201ENSMUST00000118946 630 ntBASIC13.96□□□□□ -0.17
Syne4Q8CII8 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Syne4Q8CII8 Gm15595-201ENSMUST00000120840 961 ntBASIC13.96□□□□□ -0.17
Syne4Q8CII8 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms