Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smc5Q8CG46 Gm29127-201ENSMUST00000188304 517 ntBASIC15.29■□□□□ 0.04
Smc5Q8CG46 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Smc5Q8CG46 Gm44958-201ENSMUST00000203734 736 ntBASIC15.29■□□□□ 0.04
Smc5Q8CG46 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smc5Q8CG46 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Smc5Q8CG46 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smc5Q8CG46 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Smc5Q8CG46 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smc5Q8CG46 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Smc5Q8CG46 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Smc5Q8CG46 Ptprm-203ENSMUST00000224091 3773 ntBASIC15.29■□□□□ 0.04
Smc5Q8CG46 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smc5Q8CG46 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smc5Q8CG46 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smc5Q8CG46 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smc5Q8CG46 AC093022.4-203ENSMUST00000228523 2657 ntBASIC15.29■□□□□ 0.04
Smc5Q8CG46 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smc5Q8CG46 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC15.28■□□□□ 0.04
Smc5Q8CG46 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smc5Q8CG46 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Smc5Q8CG46 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC15.28■□□□□ 0.04
Smc5Q8CG46 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smc5Q8CG46 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smc5Q8CG46 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smc5Q8CG46 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smc5Q8CG46 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smc5Q8CG46 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smc5Q8CG46 Gm12502-201ENSMUST00000120197 444 ntBASIC15.28■□□□□ 0.04
Smc5Q8CG46 Gm13342-201ENSMUST00000121055 207 ntBASIC15.28■□□□□ 0.04
Smc5Q8CG46 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
Smc5Q8CG46 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC15.28■□□□□ 0.04
Smc5Q8CG46 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC15.28■□□□□ 0.04
Smc5Q8CG46 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Smc5Q8CG46 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smc5Q8CG46 Gm44405-201ENSMUST00000198952 126 ntBASIC15.28■□□□□ 0.04
Smc5Q8CG46 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smc5Q8CG46 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smc5Q8CG46 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC15.28■□□□□ 0.04
Smc5Q8CG46 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smc5Q8CG46 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smc5Q8CG46 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smc5Q8CG46 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smc5Q8CG46 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Smc5Q8CG46 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smc5Q8CG46 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smc5Q8CG46 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smc5Q8CG46 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smc5Q8CG46 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smc5Q8CG46 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smc5Q8CG46 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smc5Q8CG46 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smc5Q8CG46 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smc5Q8CG46 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smc5Q8CG46 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smc5Q8CG46 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Smc5Q8CG46 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smc5Q8CG46 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smc5Q8CG46 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Smc5Q8CG46 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smc5Q8CG46 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Smc5Q8CG46 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smc5Q8CG46 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Smc5Q8CG46 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smc5Q8CG46 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smc5Q8CG46 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.27■□□□□ 0.04
Smc5Q8CG46 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Smc5Q8CG46 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15.27■□□□□ 0.04
Smc5Q8CG46 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smc5Q8CG46 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smc5Q8CG46 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smc5Q8CG46 Gm6222-202ENSMUST00000182143 629 ntBASIC15.27■□□□□ 0.04
Smc5Q8CG46 H2-Pa-201ENSMUST00000182803 626 ntBASIC15.27■□□□□ 0.04
Smc5Q8CG46 Gm29649-201ENSMUST00000185649 419 ntBASIC15.27■□□□□ 0.04
Smc5Q8CG46 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC15.27■□□□□ 0.04
Smc5Q8CG46 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smc5Q8CG46 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smc5Q8CG46 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC15.27■□□□□ 0.03
Smc5Q8CG46 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Smc5Q8CG46 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smc5Q8CG46 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Smc5Q8CG46 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smc5Q8CG46 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smc5Q8CG46 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Smc5Q8CG46 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC15.27■□□□□ 0.03
Smc5Q8CG46 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC15.27■□□□□ 0.03
Smc5Q8CG46 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Smc5Q8CG46 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smc5Q8CG46 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smc5Q8CG46 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Smc5Q8CG46 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC15.26■□□□□ 0.03
Smc5Q8CG46 Gm7553-201ENSMUST00000185805 1426 ntBASIC15.26■□□□□ 0.03
Smc5Q8CG46 AC108858.2-201ENSMUST00000228186 1425 ntBASIC15.26■□□□□ 0.03
Smc5Q8CG46 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc5Q8CG46 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Smc5Q8CG46 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Smc5Q8CG46 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc5Q8CG46 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc5Q8CG46 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc5Q8CG46 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms