Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 AY702102-202ENSMUST00000194651 1173 ntBASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 Gm8099-201ENSMUST00000200510 742 ntBASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 Gm43075-201ENSMUST00000198613 3905 ntBASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc87Q8CDL9 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc87Q8CDL9 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc87Q8CDL9 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc87Q8CDL9 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc87Q8CDL9 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc87Q8CDL9 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc87Q8CDL9 Gm14660-201ENSMUST00000119809 575 ntBASIC13.15□□□□□ -0.3
Ccdc87Q8CDL9 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.15□□□□□ -0.3
Ccdc87Q8CDL9 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc87Q8CDL9 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.15□□□□□ -0.3
Ccdc87Q8CDL9 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc87Q8CDL9 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc87Q8CDL9 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ccdc87Q8CDL9 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc87Q8CDL9 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc87Q8CDL9 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc87Q8CDL9 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc87Q8CDL9 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc87Q8CDL9 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc87Q8CDL9 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.15□□□□□ -0.31
Ccdc87Q8CDL9 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ccdc87Q8CDL9 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ccdc87Q8CDL9 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 Gm42943-201ENSMUST00000199676 3242 ntBASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 Gm12384-201ENSMUST00000119228 919 ntBASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 Gm16177-201ENSMUST00000120728 718 ntBASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 Gm4271-201ENSMUST00000174444 973 ntBASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc87Q8CDL9 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 111.5 ms