Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 Gm24231-201ENSMUST00000104315 133 ntBASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 Gm43818-201ENSMUST00000200605 466 ntBASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 Mir3102-201ENSMUST00000175555 104 ntBASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 Gm40466-201ENSMUST00000212174 422 ntBASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vcpip1Q8CDG3 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Gm13492-201ENSMUST00000119772 665 ntBASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Gm1335-201ENSMUST00000121653 386 ntBASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Gm18827-201ENSMUST00000188341 790 ntBASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Gm6013-201ENSMUST00000212264 699 ntBASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms