Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Prpf31Q8CCF0 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Prpf31Q8CCF0 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Gm14017-201ENSMUST00000121934 386 ntBASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Gm6963-201ENSMUST00000147879 379 ntBASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf31Q8CCF0 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf31Q8CCF0 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Prpf31Q8CCF0 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Prpf31Q8CCF0 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Prpf31Q8CCF0 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.57□□□□□ -0.24
Prpf31Q8CCF0 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf31Q8CCF0 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf31Q8CCF0 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf31Q8CCF0 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.57□□□□□ -0.24
Prpf31Q8CCF0 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.57□□□□□ -0.24
Prpf31Q8CCF0 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.57□□□□□ -0.24
Prpf31Q8CCF0 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.57□□□□□ -0.24
Prpf31Q8CCF0 Gm23119-201ENSMUST00000158610 140 ntBASIC13.57□□□□□ -0.24
Prpf31Q8CCF0 Gm45224-201ENSMUST00000208203 414 ntBASIC13.57□□□□□ -0.24
Prpf31Q8CCF0 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf31Q8CCF0 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf31Q8CCF0 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Prpf31Q8CCF0 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Prpf31Q8CCF0 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Prpf31Q8CCF0 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf31Q8CCF0 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf31Q8CCF0 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf31Q8CCF0 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf31Q8CCF0 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf31Q8CCF0 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf31Q8CCF0 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.56□□□□□ -0.24
Prpf31Q8CCF0 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf31Q8CCF0 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf31Q8CCF0 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf31Q8CCF0 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Prpf31Q8CCF0 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf31Q8CCF0 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Prpf31Q8CCF0 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf31Q8CCF0 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf31Q8CCF0 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Prpf31Q8CCF0 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Prpf31Q8CCF0 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf31Q8CCF0 Gm14644-201ENSMUST00000116671 647 ntBASIC13.56□□□□□ -0.24
Prpf31Q8CCF0 Gm9083-201ENSMUST00000120423 819 ntBASIC13.56□□□□□ -0.24
Prpf31Q8CCF0 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf31Q8CCF0 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.56□□□□□ -0.24
Prpf31Q8CCF0 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.56□□□□□ -0.24
Prpf31Q8CCF0 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf31Q8CCF0 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.56□□□□□ -0.24
Prpf31Q8CCF0 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.56□□□□□ -0.24
Prpf31Q8CCF0 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC13.56□□□□□ -0.24
Prpf31Q8CCF0 Rprl1-202ENSMUST00000198476 238 ntBASIC13.56□□□□□ -0.24
Prpf31Q8CCF0 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf31Q8CCF0 Gm44958-201ENSMUST00000203734 736 ntBASIC13.56□□□□□ -0.24
Prpf31Q8CCF0 Gm44262-201ENSMUST00000204969 372 ntBASIC13.56□□□□□ -0.24
Prpf31Q8CCF0 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.56□□□□□ -0.24
Prpf31Q8CCF0 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.56□□□□□ -0.24
Prpf31Q8CCF0 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.56□□□□□ -0.24
Prpf31Q8CCF0 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf31Q8CCF0 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms