Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Gm8213-201ENSMUST00000118191 441 ntBASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Gm11964-201ENSMUST00000120982 444 ntBASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Gm5866-201ENSMUST00000177881 973 ntBASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Gm27243-201ENSMUST00000183964 521 ntBASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Gm4034-201ENSMUST00000187674 480 ntBASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Gm2231-201ENSMUST00000125661 612 ntBASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lysmd4Q8CC84 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Lysmd4Q8CC84 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms