Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa4Q8CA71 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Shisa4Q8CA71 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC14.33□□□□□ -0.11
Shisa4Q8CA71 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Shisa4Q8CA71 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Shisa4Q8CA71 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa4Q8CA71 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.33□□□□□ -0.12
Shisa4Q8CA71 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa4Q8CA71 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa4Q8CA71 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa4Q8CA71 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa4Q8CA71 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa4Q8CA71 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa4Q8CA71 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Shisa4Q8CA71 Gm13996-201ENSMUST00000118456 430 ntBASIC14.33□□□□□ -0.12
Shisa4Q8CA71 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa4Q8CA71 Gm13665-201ENSMUST00000120830 528 ntBASIC14.33□□□□□ -0.12
Shisa4Q8CA71 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa4Q8CA71 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa4Q8CA71 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.33□□□□□ -0.12
Shisa4Q8CA71 Gm27390-201ENSMUST00000184516 176 ntBASIC14.33□□□□□ -0.12
Shisa4Q8CA71 Gm9230-201ENSMUST00000188228 532 ntBASIC14.33□□□□□ -0.12
Shisa4Q8CA71 Gm9678-201ENSMUST00000198979 1149 ntBASIC14.33□□□□□ -0.12
Shisa4Q8CA71 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Shisa4Q8CA71 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Shisa4Q8CA71 Gm19692-201ENSMUST00000203856 2084 ntBASIC14.33□□□□□ -0.12
Shisa4Q8CA71 Crry-ps-201ENSMUST00000079090 1309 ntBASIC14.33□□□□□ -0.12
Shisa4Q8CA71 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa4Q8CA71 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa4Q8CA71 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa4Q8CA71 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.33□□□□□ -0.12
Shisa4Q8CA71 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa4Q8CA71 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.32□□□□□ -0.12
Shisa4Q8CA71 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa4Q8CA71 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa4Q8CA71 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa4Q8CA71 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa4Q8CA71 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa4Q8CA71 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa4Q8CA71 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa4Q8CA71 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa4Q8CA71 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa4Q8CA71 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa4Q8CA71 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Shisa4Q8CA71 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa4Q8CA71 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa4Q8CA71 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa4Q8CA71 Gm11989-201ENSMUST00000117240 672 ntBASIC14.32□□□□□ -0.12
Shisa4Q8CA71 Gm11362-201ENSMUST00000118838 850 ntBASIC14.32□□□□□ -0.12
Shisa4Q8CA71 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Shisa4Q8CA71 Gm14277-201ENSMUST00000121195 360 ntBASIC14.32□□□□□ -0.12
Shisa4Q8CA71 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC14.32□□□□□ -0.12
Shisa4Q8CA71 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC14.32□□□□□ -0.12
Shisa4Q8CA71 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.32□□□□□ -0.12
Shisa4Q8CA71 Gm32999-201ENSMUST00000192693 562 ntBASIC14.32□□□□□ -0.12
Shisa4Q8CA71 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa4Q8CA71 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa4Q8CA71 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa4Q8CA71 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa4Q8CA71 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14.32□□□□□ -0.12
Shisa4Q8CA71 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.32□□□□□ -0.12
Shisa4Q8CA71 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa4Q8CA71 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Shisa4Q8CA71 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa4Q8CA71 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa4Q8CA71 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa4Q8CA71 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa4Q8CA71 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa4Q8CA71 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.31□□□□□ -0.12
Shisa4Q8CA71 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa4Q8CA71 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa4Q8CA71 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa4Q8CA71 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa4Q8CA71 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa4Q8CA71 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa4Q8CA71 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa4Q8CA71 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa4Q8CA71 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Shisa4Q8CA71 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC14.31□□□□□ -0.12
Shisa4Q8CA71 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Shisa4Q8CA71 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa4Q8CA71 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa4Q8CA71 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Shisa4Q8CA71 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa4Q8CA71 Gm27530-201ENSMUST00000184096 98 ntBASIC14.31□□□□□ -0.12
Shisa4Q8CA71 Mir6927-201ENSMUST00000184494 71 ntBASIC14.31□□□□□ -0.12
Shisa4Q8CA71 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC14.31□□□□□ -0.12
Shisa4Q8CA71 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC14.31□□□□□ -0.12
Shisa4Q8CA71 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC14.31□□□□□ -0.12
Shisa4Q8CA71 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.31□□□□□ -0.12
Shisa4Q8CA71 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.31□□□□□ -0.12
Shisa4Q8CA71 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa4Q8CA71 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa4Q8CA71 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa4Q8CA71 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa4Q8CA71 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
Shisa4Q8CA71 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa4Q8CA71 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.31□□□□□ -0.12
Shisa4Q8CA71 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa4Q8CA71 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms