Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Gm13600-201ENSMUST00000117949 744 ntBASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Gm42518-201ENSMUST00000196277 938 ntBASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Gm23153-201ENSMUST00000175323 313 ntBASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Gm8492-201ENSMUST00000182375 987 ntBASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Mir7677-201ENSMUST00000184226 67 ntBASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Gm5733-201ENSMUST00000190232 939 ntBASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Gm15595-201ENSMUST00000120840 961 ntBASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a6Q8C6K9 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Gm8199-201ENSMUST00000121323 823 ntBASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Gm17889-201ENSMUST00000198410 598 ntBASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Gm9463-201ENSMUST00000206707 601 ntBASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms