Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ube3dQ8BX13 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube3dQ8BX13 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube3dQ8BX13 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube3dQ8BX13 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube3dQ8BX13 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube3dQ8BX13 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.06□□□□□ -0.64
Ube3dQ8BX13 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube3dQ8BX13 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube3dQ8BX13 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube3dQ8BX13 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ube3dQ8BX13 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube3dQ8BX13 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube3dQ8BX13 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube3dQ8BX13 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Ube3dQ8BX13 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube3dQ8BX13 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC11.06□□□□□ -0.64
Ube3dQ8BX13 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.06□□□□□ -0.64
Ube3dQ8BX13 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.06□□□□□ -0.64
Ube3dQ8BX13 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.06□□□□□ -0.64
Ube3dQ8BX13 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.06□□□□□ -0.64
Ube3dQ8BX13 Gm9368-201ENSMUST00000219348 831 ntBASIC11.06□□□□□ -0.64
Ube3dQ8BX13 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.06□□□□□ -0.64
Ube3dQ8BX13 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ube3dQ8BX13 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube3dQ8BX13 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.06□□□□□ -0.64
Ube3dQ8BX13 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube3dQ8BX13 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube3dQ8BX13 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube3dQ8BX13 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.06□□□□□ -0.64
Ube3dQ8BX13 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube3dQ8BX13 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ube3dQ8BX13 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube3dQ8BX13 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube3dQ8BX13 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube3dQ8BX13 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube3dQ8BX13 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube3dQ8BX13 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube3dQ8BX13 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube3dQ8BX13 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ube3dQ8BX13 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ube3dQ8BX13 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.05□□□□□ -0.64
Ube3dQ8BX13 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ube3dQ8BX13 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.05□□□□□ -0.64
Ube3dQ8BX13 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube3dQ8BX13 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube3dQ8BX13 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube3dQ8BX13 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ube3dQ8BX13 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube3dQ8BX13 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube3dQ8BX13 Gm12241-201ENSMUST00000118330 726 ntBASIC11.05□□□□□ -0.64
Ube3dQ8BX13 Gm13342-201ENSMUST00000121055 207 ntBASIC11.05□□□□□ -0.64
Ube3dQ8BX13 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ube3dQ8BX13 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Ube3dQ8BX13 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Ube3dQ8BX13 Gm44364-201ENSMUST00000198368 141 ntBASIC11.05□□□□□ -0.64
Ube3dQ8BX13 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube3dQ8BX13 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube3dQ8BX13 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube3dQ8BX13 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube3dQ8BX13 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Ube3dQ8BX13 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Ube3dQ8BX13 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube3dQ8BX13 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Ube3dQ8BX13 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube3dQ8BX13 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.05□□□□□ -0.64
Ube3dQ8BX13 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ube3dQ8BX13 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube3dQ8BX13 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube3dQ8BX13 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube3dQ8BX13 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube3dQ8BX13 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube3dQ8BX13 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube3dQ8BX13 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.05□□□□□ -0.64
Ube3dQ8BX13 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ube3dQ8BX13 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.04□□□□□ -0.64
Ube3dQ8BX13 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.04□□□□□ -0.64
Ube3dQ8BX13 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ube3dQ8BX13 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ube3dQ8BX13 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.04□□□□□ -0.64
Ube3dQ8BX13 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ube3dQ8BX13 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ube3dQ8BX13 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ube3dQ8BX13 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms