Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup54Q8BTS4 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup54Q8BTS4 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup54Q8BTS4 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Mir877-201ENSMUST00000104738 85 ntBASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Gm44124-201ENSMUST00000204159 472 ntBASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Gm19994-201ENSMUST00000217086 586 ntBASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Gzmn-202ENSMUST00000225535 989 ntBASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.68□□□□□ -0.38
Nup54Q8BTS4 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup54Q8BTS4 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nup54Q8BTS4 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.67□□□□□ -0.38
Nup54Q8BTS4 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup54Q8BTS4 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup54Q8BTS4 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nup54Q8BTS4 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup54Q8BTS4 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.67□□□□□ -0.38
Nup54Q8BTS4 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Nup54Q8BTS4 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup54Q8BTS4 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup54Q8BTS4 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup54Q8BTS4 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup54Q8BTS4 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Nup54Q8BTS4 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup54Q8BTS4 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Nup54Q8BTS4 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Nup54Q8BTS4 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup54Q8BTS4 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.67□□□□□ -0.38
Nup54Q8BTS4 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Nup54Q8BTS4 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup54Q8BTS4 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup54Q8BTS4 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.67□□□□□ -0.38
Nup54Q8BTS4 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Nup54Q8BTS4 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup54Q8BTS4 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup54Q8BTS4 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup54Q8BTS4 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nup54Q8BTS4 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Nup54Q8BTS4 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.67□□□□□ -0.38
Nup54Q8BTS4 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Nup54Q8BTS4 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup54Q8BTS4 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nup54Q8BTS4 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup54Q8BTS4 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup54Q8BTS4 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms