Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp54Q8BL06 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Usp54Q8BL06 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp54Q8BL06 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp54Q8BL06 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp54Q8BL06 Gm17798-201ENSMUST00000182282 1035 ntBASIC17.3■□□□□ 0.36
Usp54Q8BL06 Gm37981-201ENSMUST00000194280 535 ntBASIC17.3■□□□□ 0.36
Usp54Q8BL06 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC17.3■□□□□ 0.36
Usp54Q8BL06 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Usp54Q8BL06 AC154176.1-201ENSMUST00000225897 220 ntBASIC17.3■□□□□ 0.36
Usp54Q8BL06 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Usp54Q8BL06 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp54Q8BL06 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp54Q8BL06 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp54Q8BL06 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp54Q8BL06 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp54Q8BL06 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp54Q8BL06 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp54Q8BL06 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Usp54Q8BL06 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC17.29■□□□□ 0.36
Usp54Q8BL06 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC17.29■□□□□ 0.36
Usp54Q8BL06 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Usp54Q8BL06 Mir6407-201ENSMUST00000184510 101 ntBASIC17.29■□□□□ 0.36
Usp54Q8BL06 Gm29410-201ENSMUST00000188383 694 ntBASIC17.29■□□□□ 0.36
Usp54Q8BL06 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp54Q8BL06 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC17.29■□□□□ 0.36
Usp54Q8BL06 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
Usp54Q8BL06 n-R5s211-201ENSMUST00000093689 119 ntBASIC17.29■□□□□ 0.36
Usp54Q8BL06 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp54Q8BL06 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp54Q8BL06 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp54Q8BL06 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp54Q8BL06 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Usp54Q8BL06 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp54Q8BL06 Gm37859-201ENSMUST00000195529 2173 ntBASIC17.29■□□□□ 0.36
Usp54Q8BL06 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC17.29■□□□□ 0.36
Usp54Q8BL06 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Usp54Q8BL06 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC17.29■□□□□ 0.36
Usp54Q8BL06 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Usp54Q8BL06 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC17.29■□□□□ 0.36
Usp54Q8BL06 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC17.29■□□□□ 0.36
Usp54Q8BL06 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Gm25766-201ENSMUST00000104101 131 ntBASIC17.28■□□□□ 0.36
Usp54Q8BL06 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Gm19091-201ENSMUST00000208120 978 ntBASIC17.28■□□□□ 0.36
Usp54Q8BL06 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp54Q8BL06 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp54Q8BL06 AC136376.2-201ENSMUST00000228819 490 ntBASIC17.28■□□□□ 0.36
Usp54Q8BL06 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Gm44414-201ENSMUST00000203660 2109 ntBASIC17.28■□□□□ 0.36
Usp54Q8BL06 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp54Q8BL06 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp54Q8BL06 AC159195.1-201ENSMUST00000225867 2086 ntBASIC17.28■□□□□ 0.36
Usp54Q8BL06 Gm11422-201ENSMUST00000118925 1103 ntBASIC17.28■□□□□ 0.36
Usp54Q8BL06 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Gm3017-201ENSMUST00000203603 1126 ntBASIC17.28■□□□□ 0.36
Usp54Q8BL06 Gm6108-201ENSMUST00000208365 367 ntBASIC17.28■□□□□ 0.36
Usp54Q8BL06 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp54Q8BL06 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC17.27■□□□□ 0.36
Usp54Q8BL06 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Usp54Q8BL06 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp54Q8BL06 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp54Q8BL06 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp54Q8BL06 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp54Q8BL06 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp54Q8BL06 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp54Q8BL06 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms