Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.33□□□□□ -0.28
Nop53Q8BK35 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.33□□□□□ -0.28
Nop53Q8BK35 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nop53Q8BK35 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.33□□□□□ -0.28
Nop53Q8BK35 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nop53Q8BK35 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nop53Q8BK35 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nop53Q8BK35 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Nop53Q8BK35 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nop53Q8BK35 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC13.33□□□□□ -0.28
Nop53Q8BK35 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nop53Q8BK35 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nop53Q8BK35 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nop53Q8BK35 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nop53Q8BK35 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nop53Q8BK35 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nop53Q8BK35 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nop53Q8BK35 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nop53Q8BK35 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nop53Q8BK35 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nop53Q8BK35 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nop53Q8BK35 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nop53Q8BK35 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nop53Q8BK35 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nop53Q8BK35 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nop53Q8BK35 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nop53Q8BK35 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.32□□□□□ -0.28
Nop53Q8BK35 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Nop53Q8BK35 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.32□□□□□ -0.28
Nop53Q8BK35 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.32□□□□□ -0.28
Nop53Q8BK35 Gm24644-201ENSMUST00000157114 139 ntBASIC13.32□□□□□ -0.28
Nop53Q8BK35 Mir1938-201ENSMUST00000158746 100 ntBASIC13.32□□□□□ -0.28
Nop53Q8BK35 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.32□□□□□ -0.28
Nop53Q8BK35 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nop53Q8BK35 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC13.32□□□□□ -0.28
Nop53Q8BK35 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.32□□□□□ -0.28
Nop53Q8BK35 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Nop53Q8BK35 Gm10146-201ENSMUST00000072739 309 ntBASIC13.32□□□□□ -0.28
Nop53Q8BK35 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Nop53Q8BK35 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nop53Q8BK35 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Nop53Q8BK35 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
Nop53Q8BK35 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nop53Q8BK35 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Nop53Q8BK35 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.32□□□□□ -0.28
Nop53Q8BK35 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nop53Q8BK35 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nop53Q8BK35 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nop53Q8BK35 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nop53Q8BK35 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.32□□□□□ -0.28
Nop53Q8BK35 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nop53Q8BK35 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nop53Q8BK35 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nop53Q8BK35 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nop53Q8BK35 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nop53Q8BK35 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Nop53Q8BK35 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Nop53Q8BK35 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Nop53Q8BK35 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nop53Q8BK35 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.31□□□□□ -0.28
Nop53Q8BK35 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.31□□□□□ -0.28
Nop53Q8BK35 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Nop53Q8BK35 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nop53Q8BK35 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nop53Q8BK35 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nop53Q8BK35 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nop53Q8BK35 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nop53Q8BK35 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.31□□□□□ -0.28
Nop53Q8BK35 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Nop53Q8BK35 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nop53Q8BK35 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.31□□□□□ -0.28
Nop53Q8BK35 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nop53Q8BK35 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nop53Q8BK35 Gm12742-201ENSMUST00000117326 410 ntBASIC13.31□□□□□ -0.28
Nop53Q8BK35 Gm15626-201ENSMUST00000117478 868 ntBASIC13.31□□□□□ -0.28
Nop53Q8BK35 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nop53Q8BK35 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC13.31□□□□□ -0.28
Nop53Q8BK35 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Nop53Q8BK35 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Nop53Q8BK35 Gm27731-201ENSMUST00000185192 107 ntBASIC13.31□□□□□ -0.28
Nop53Q8BK35 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nop53Q8BK35 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.31□□□□□ -0.28
Nop53Q8BK35 Gm45696-201ENSMUST00000212088 985 ntBASIC13.31□□□□□ -0.28
Nop53Q8BK35 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.31□□□□□ -0.28
Nop53Q8BK35 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.31□□□□□ -0.28
Nop53Q8BK35 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.31□□□□□ -0.28
Nop53Q8BK35 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nop53Q8BK35 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nop53Q8BK35 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nop53Q8BK35 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nop53Q8BK35 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.31□□□□□ -0.28
Nop53Q8BK35 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nop53Q8BK35 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nop53Q8BK35 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Nop53Q8BK35 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nop53Q8BK35 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nop53Q8BK35 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nop53Q8BK35 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nop53Q8BK35 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nop53Q8BK35 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms