Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Gm6244-201ENSMUST00000178732 841 ntBASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Gm24196-201ENSMUST00000179161 110 ntBASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Gm27390-201ENSMUST00000184516 176 ntBASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Chmp2bQ8BJF9 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chmp2bQ8BJF9 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Chmp2bQ8BJF9 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.71□□□□□ -0.38
Chmp2bQ8BJF9 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chmp2bQ8BJF9 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Chmp2bQ8BJF9 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chmp2bQ8BJF9 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chmp2bQ8BJF9 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Chmp2bQ8BJF9 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Gm8652-201ENSMUST00000181363 964 ntBASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Gm19163-201ENSMUST00000223313 780 ntBASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Gm10012-201ENSMUST00000078252 192 ntBASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2bQ8BJF9 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms