Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ush1gQ80T11 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ush1gQ80T11 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ush1gQ80T11 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.59□□□□□ -0.23
Ush1gQ80T11 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ush1gQ80T11 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ush1gQ80T11 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ush1gQ80T11 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ush1gQ80T11 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ush1gQ80T11 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.58□□□□□ -0.23
Ush1gQ80T11 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Ush1gQ80T11 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Ush1gQ80T11 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ush1gQ80T11 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ush1gQ80T11 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ush1gQ80T11 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.58□□□□□ -0.24
Ush1gQ80T11 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ush1gQ80T11 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ush1gQ80T11 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ush1gQ80T11 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ush1gQ80T11 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ush1gQ80T11 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ush1gQ80T11 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ush1gQ80T11 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ush1gQ80T11 Gm9062-201ENSMUST00000117712 727 ntBASIC13.58□□□□□ -0.24
Ush1gQ80T11 Gm6963-201ENSMUST00000147879 379 ntBASIC13.58□□□□□ -0.24
Ush1gQ80T11 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.58□□□□□ -0.24
Ush1gQ80T11 Gm5070-201ENSMUST00000177599 862 ntBASIC13.58□□□□□ -0.24
Ush1gQ80T11 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Ush1gQ80T11 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.58□□□□□ -0.24
Ush1gQ80T11 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.58□□□□□ -0.24
Ush1gQ80T11 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.58□□□□□ -0.24
Ush1gQ80T11 Spcs1-203ENSMUST00000226374 592 ntBASIC13.58□□□□□ -0.24
Ush1gQ80T11 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ush1gQ80T11 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ush1gQ80T11 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Ush1gQ80T11 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.58□□□□□ -0.24
Ush1gQ80T11 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ush1gQ80T11 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ush1gQ80T11 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ush1gQ80T11 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ush1gQ80T11 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ush1gQ80T11 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ush1gQ80T11 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ush1gQ80T11 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.58□□□□□ -0.24
Ush1gQ80T11 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ush1gQ80T11 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ush1gQ80T11 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ush1gQ80T11 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ush1gQ80T11 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ush1gQ80T11 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ush1gQ80T11 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Ush1gQ80T11 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ush1gQ80T11 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ush1gQ80T11 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.57□□□□□ -0.24
Ush1gQ80T11 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ush1gQ80T11 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ush1gQ80T11 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ush1gQ80T11 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ush1gQ80T11 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Ush1gQ80T11 Gm12015-201ENSMUST00000117065 843 ntBASIC13.57□□□□□ -0.24
Ush1gQ80T11 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ush1gQ80T11 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ush1gQ80T11 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.57□□□□□ -0.24
Ush1gQ80T11 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.57□□□□□ -0.24
Ush1gQ80T11 Gm27552-201ENSMUST00000183351 62 ntBASIC13.57□□□□□ -0.24
Ush1gQ80T11 Gm27844-201ENSMUST00000183613 62 ntBASIC13.57□□□□□ -0.24
Ush1gQ80T11 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC13.57□□□□□ -0.24
Ush1gQ80T11 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC13.57□□□□□ -0.24
Ush1gQ80T11 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC13.57□□□□□ -0.24
Ush1gQ80T11 Gm45598-202ENSMUST00000210719 986 ntBASIC13.57□□□□□ -0.24
Ush1gQ80T11 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ush1gQ80T11 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.57□□□□□ -0.24
Ush1gQ80T11 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ush1gQ80T11 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ush1gQ80T11 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ush1gQ80T11 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ush1gQ80T11 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ush1gQ80T11 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ush1gQ80T11 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ush1gQ80T11 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ush1gQ80T11 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Ush1gQ80T11 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ush1gQ80T11 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ush1gQ80T11 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ush1gQ80T11 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.57□□□□□ -0.24
Ush1gQ80T11 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ush1gQ80T11 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ush1gQ80T11 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ush1gQ80T11 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ush1gQ80T11 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ush1gQ80T11 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ush1gQ80T11 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ush1gQ80T11 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ush1gQ80T11 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ush1gQ80T11 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ush1gQ80T11 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ush1gQ80T11 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ush1gQ80T11 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ush1gQ80T11 Gm15703-201ENSMUST00000120250 880 ntBASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms