Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh8Q7TSK3 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh8Q7TSK3 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.27□□□□□ -0.45
Pcdh8Q7TSK3 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh8Q7TSK3 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh8Q7TSK3 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.27□□□□□ -0.45
Pcdh8Q7TSK3 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh8Q7TSK3 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh8Q7TSK3 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh8Q7TSK3 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.27□□□□□ -0.45
Pcdh8Q7TSK3 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh8Q7TSK3 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh8Q7TSK3 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh8Q7TSK3 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh8Q7TSK3 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Gm13570-201ENSMUST00000140763 309 ntBASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh8Q7TSK3 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.25□□□□□ -0.45
Pcdh8Q7TSK3 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.25□□□□□ -0.45
Pcdh8Q7TSK3 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh8Q7TSK3 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh8Q7TSK3 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh8Q7TSK3 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh8Q7TSK3 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pcdh8Q7TSK3 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pcdh8Q7TSK3 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh8Q7TSK3 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.25□□□□□ -0.45
Pcdh8Q7TSK3 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdh8Q7TSK3 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh8Q7TSK3 Mir7070-201ENSMUST00000183657 86 ntBASIC12.25□□□□□ -0.45
Pcdh8Q7TSK3 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdh8Q7TSK3 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdh8Q7TSK3 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh8Q7TSK3 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh8Q7TSK3 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh8Q7TSK3 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh8Q7TSK3 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh8Q7TSK3 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.25□□□□□ -0.45
Pcdh8Q7TSK3 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh8Q7TSK3 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh8Q7TSK3 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdh8Q7TSK3 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdh8Q7TSK3 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh8Q7TSK3 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh8Q7TSK3 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pcdh8Q7TSK3 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Pcdh8Q7TSK3 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms