Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sp140Q6NSQ5 Gm18187-201ENSMUST00000196476 984 ntBASIC12.58□□□□□ -0.4
Sp140Q6NSQ5 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sp140Q6NSQ5 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.58□□□□□ -0.4
Sp140Q6NSQ5 Gm45930-201ENSMUST00000221330 292 ntBASIC12.58□□□□□ -0.4
Sp140Q6NSQ5 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sp140Q6NSQ5 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sp140Q6NSQ5 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sp140Q6NSQ5 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sp140Q6NSQ5 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sp140Q6NSQ5 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sp140Q6NSQ5 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.58□□□□□ -0.4
Sp140Q6NSQ5 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.58□□□□□ -0.4
Sp140Q6NSQ5 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sp140Q6NSQ5 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sp140Q6NSQ5 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Sp140Q6NSQ5 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sp140Q6NSQ5 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sp140Q6NSQ5 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sp140Q6NSQ5 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sp140Q6NSQ5 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sp140Q6NSQ5 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sp140Q6NSQ5 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Gm9083-201ENSMUST00000120423 819 ntBASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Gm13316-201ENSMUST00000140537 691 ntBASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Mir1982-201ENSMUST00000157368 74 ntBASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Gm24548-201ENSMUST00000158650 108 ntBASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Gm27514-201ENSMUST00000183692 110 ntBASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Gm6007-201ENSMUST00000208170 823 ntBASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sp140Q6NSQ5 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Gm12314-201ENSMUST00000118104 538 ntBASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Gm13342-201ENSMUST00000121055 207 ntBASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Gm37008-201ENSMUST00000195712 319 ntBASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms