Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Krt42Q6IFX2 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.7□□□□□ -0.38
Krt42Q6IFX2 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Krt42Q6IFX2 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt42Q6IFX2 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Krt42Q6IFX2 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Krt42Q6IFX2 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt42Q6IFX2 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt42Q6IFX2 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt42Q6IFX2 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt42Q6IFX2 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Krt42Q6IFX2 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Krt42Q6IFX2 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Krt42Q6IFX2 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.69□□□□□ -0.38
Krt42Q6IFX2 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.69□□□□□ -0.38
Krt42Q6IFX2 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Krt42Q6IFX2 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.69□□□□□ -0.38
Krt42Q6IFX2 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Krt42Q6IFX2 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.69□□□□□ -0.38
Krt42Q6IFX2 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Krt42Q6IFX2 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Krt42Q6IFX2 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.69□□□□□ -0.38
Krt42Q6IFX2 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.69□□□□□ -0.38
Krt42Q6IFX2 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.69□□□□□ -0.38
Krt42Q6IFX2 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.69□□□□□ -0.38
Krt42Q6IFX2 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.69□□□□□ -0.38
Krt42Q6IFX2 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt42Q6IFX2 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt42Q6IFX2 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt42Q6IFX2 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.69□□□□□ -0.38
Krt42Q6IFX2 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt42Q6IFX2 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Krt42Q6IFX2 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt42Q6IFX2 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.69□□□□□ -0.38
Krt42Q6IFX2 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Krt42Q6IFX2 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt42Q6IFX2 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt42Q6IFX2 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt42Q6IFX2 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.69□□□□□ -0.38
Krt42Q6IFX2 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Krt42Q6IFX2 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.69□□□□□ -0.38
Krt42Q6IFX2 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Gm14701-201ENSMUST00000117156 348 ntBASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Gm12384-201ENSMUST00000119228 919 ntBASIC12.68□□□□□ -0.38
Krt42Q6IFX2 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt42Q6IFX2 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt42Q6IFX2 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Krt42Q6IFX2 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt42Q6IFX2 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.67□□□□□ -0.38
Krt42Q6IFX2 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt42Q6IFX2 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.67□□□□□ -0.38
Krt42Q6IFX2 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Krt42Q6IFX2 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt42Q6IFX2 Cog3-203ENSMUST00000227473 4197 ntBASIC12.67□□□□□ -0.38
Krt42Q6IFX2 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Krt42Q6IFX2 Snord83b-201ENSMUST00000104546 94 ntBASIC12.67□□□□□ -0.38
Krt42Q6IFX2 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.67□□□□□ -0.38
Krt42Q6IFX2 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Krt42Q6IFX2 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Krt42Q6IFX2 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt42Q6IFX2 Gm23363-201ENSMUST00000175024 79 ntBASIC12.67□□□□□ -0.38
Krt42Q6IFX2 Gm22121-201ENSMUST00000175148 54 ntBASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms