Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm10583-201ENSMUST00000097988 396 ntBASIC11.32□□□□□ -0.6
VcanQ62059 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VcanQ62059 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
VcanQ62059 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VcanQ62059 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VcanQ62059 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.32□□□□□ -0.6
VcanQ62059 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
VcanQ62059 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
VcanQ62059 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
VcanQ62059 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.32□□□□□ -0.6
VcanQ62059 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.32□□□□□ -0.6
VcanQ62059 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VcanQ62059 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
VcanQ62059 Gm28686-201ENSMUST00000187404 609 ntBASIC11.32□□□□□ -0.6
VcanQ62059 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VcanQ62059 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.32□□□□□ -0.6
VcanQ62059 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
VcanQ62059 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
VcanQ62059 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VcanQ62059 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
VcanQ62059 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VcanQ62059 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VcanQ62059 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VcanQ62059 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
VcanQ62059 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VcanQ62059 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC11.31□□□□□ -0.6
VcanQ62059 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.31□□□□□ -0.6
VcanQ62059 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
VcanQ62059 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC11.31□□□□□ -0.6
VcanQ62059 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
VcanQ62059 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VcanQ62059 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VcanQ62059 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
VcanQ62059 Gm37851-201ENSMUST00000193871 889 ntBASIC11.31□□□□□ -0.6
VcanQ62059 Gm2474-201ENSMUST00000195162 559 ntBASIC11.31□□□□□ -0.6
VcanQ62059 Gm5650-201ENSMUST00000209641 598 ntBASIC11.31□□□□□ -0.6
VcanQ62059 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VcanQ62059 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VcanQ62059 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.31□□□□□ -0.6
VcanQ62059 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VcanQ62059 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VcanQ62059 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
VcanQ62059 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC11.31□□□□□ -0.6
VcanQ62059 Gm13117-201ENSMUST00000120894 691 ntBASIC11.31□□□□□ -0.6
VcanQ62059 Gm43249-201ENSMUST00000200464 458 ntBASIC11.31□□□□□ -0.6
VcanQ62059 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
VcanQ62059 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VcanQ62059 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.31□□□□□ -0.6
VcanQ62059 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VcanQ62059 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VcanQ62059 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.31□□□□□ -0.6
VcanQ62059 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VcanQ62059 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VcanQ62059 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VcanQ62059 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VcanQ62059 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VcanQ62059 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VcanQ62059 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VcanQ62059 Gm7069-201ENSMUST00000182418 1008 ntBASIC11.31□□□□□ -0.6
VcanQ62059 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC11.31□□□□□ -0.6
VcanQ62059 Gm6331-201ENSMUST00000217890 450 ntBASIC11.31□□□□□ -0.6
VcanQ62059 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VcanQ62059 Gm17541-201ENSMUST00000080062 525 ntBASIC11.31□□□□□ -0.6
VcanQ62059 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VcanQ62059 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VcanQ62059 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VcanQ62059 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
VcanQ62059 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
VcanQ62059 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC11.3□□□□□ -0.6
VcanQ62059 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
VcanQ62059 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC11.3□□□□□ -0.6
VcanQ62059 Mir1905-201ENSMUST00000122779 82 ntBASIC11.3□□□□□ -0.6
VcanQ62059 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VcanQ62059 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
VcanQ62059 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VcanQ62059 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC11.3□□□□□ -0.6
VcanQ62059 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VcanQ62059 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VcanQ62059 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
VcanQ62059 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VcanQ62059 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
VcanQ62059 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
VcanQ62059 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VcanQ62059 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
VcanQ62059 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VcanQ62059 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
VcanQ62059 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VcanQ62059 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
VcanQ62059 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VcanQ62059 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.3□□□□□ -0.6
VcanQ62059 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
VcanQ62059 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC11.3□□□□□ -0.6
VcanQ62059 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC11.3□□□□□ -0.6
VcanQ62059 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
VcanQ62059 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.3□□□□□ -0.6
VcanQ62059 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VcanQ62059 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
VcanQ62059 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VcanQ62059 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
VcanQ62059 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms