Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Six4Q61321 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Six4Q61321 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Six4Q61321 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Six4Q61321 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Six4Q61321 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Six4Q61321 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Six4Q61321 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Six4Q61321 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Six4Q61321 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.49□□□□□ -0.41
Six4Q61321 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.49□□□□□ -0.41
Six4Q61321 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.49□□□□□ -0.41
Six4Q61321 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.49□□□□□ -0.41
Six4Q61321 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.49□□□□□ -0.41
Six4Q61321 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Six4Q61321 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.49□□□□□ -0.41
Six4Q61321 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.49□□□□□ -0.41
Six4Q61321 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Six4Q61321 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.49□□□□□ -0.41
Six4Q61321 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.49□□□□□ -0.41
Six4Q61321 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.49□□□□□ -0.41
Six4Q61321 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Six4Q61321 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Six4Q61321 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Six4Q61321 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Six4Q61321 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Six4Q61321 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Six4Q61321 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Six4Q61321 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Six4Q61321 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Six4Q61321 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Six4Q61321 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.49□□□□□ -0.41
Six4Q61321 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.49□□□□□ -0.41
Six4Q61321 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Six4Q61321 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.49□□□□□ -0.41
Six4Q61321 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Six4Q61321 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six4Q61321 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six4Q61321 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six4Q61321 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six4Q61321 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six4Q61321 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six4Q61321 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Six4Q61321 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Six4Q61321 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Six4Q61321 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Six4Q61321 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Six4Q61321 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Six4Q61321 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Six4Q61321 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Six4Q61321 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Six4Q61321 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six4Q61321 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six4Q61321 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Six4Q61321 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Six4Q61321 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.48□□□□□ -0.41
Six4Q61321 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Six4Q61321 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Six4Q61321 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Six4Q61321 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six4Q61321 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.48□□□□□ -0.41
Six4Q61321 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Six4Q61321 Gm19994-201ENSMUST00000217086 586 ntBASIC12.48□□□□□ -0.41
Six4Q61321 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.48□□□□□ -0.41
Six4Q61321 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six4Q61321 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six4Q61321 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six4Q61321 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Six4Q61321 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six4Q61321 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Six4Q61321 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Six4Q61321 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Six4Q61321 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six4Q61321 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.48□□□□□ -0.41
Six4Q61321 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Six4Q61321 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six4Q61321 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Six4Q61321 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Six4Q61321 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six4Q61321 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six4Q61321 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Six4Q61321 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Six4Q61321 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six4Q61321 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six4Q61321 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Six4Q61321 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six4Q61321 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six4Q61321 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Six4Q61321 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six4Q61321 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Six4Q61321 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six4Q61321 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Six4Q61321 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Six4Q61321 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.47□□□□□ -0.41
Six4Q61321 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six4Q61321 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six4Q61321 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six4Q61321 Gm24830-201ENSMUST00000102024 166 ntBASIC12.47□□□□□ -0.41
Six4Q61321 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Six4Q61321 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms