Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a4Q60857 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a4Q60857 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Slc6a4Q60857 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a4Q60857 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a4Q60857 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a4Q60857 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.69□□□□□ -0.38
Slc6a4Q60857 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a4Q60857 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.68□□□□□ -0.38
Slc6a4Q60857 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Slc6a4Q60857 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.68□□□□□ -0.38
Slc6a4Q60857 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Gm37666-201ENSMUST00000194110 866 ntBASIC12.68□□□□□ -0.38
Slc6a4Q60857 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Gm17812-201ENSMUST00000204935 318 ntBASIC12.68□□□□□ -0.38
Slc6a4Q60857 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.68□□□□□ -0.38
Slc6a4Q60857 Gm45433-201ENSMUST00000209386 247 ntBASIC12.68□□□□□ -0.38
Slc6a4Q60857 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.68□□□□□ -0.38
Slc6a4Q60857 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.68□□□□□ -0.38
Slc6a4Q60857 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.68□□□□□ -0.38
Slc6a4Q60857 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a4Q60857 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Slc6a4Q60857 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Slc6a4Q60857 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Slc6a4Q60857 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a4Q60857 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a4Q60857 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Slc6a4Q60857 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a4Q60857 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Slc6a4Q60857 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a4Q60857 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.67□□□□□ -0.38
Slc6a4Q60857 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.67□□□□□ -0.38
Slc6a4Q60857 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a4Q60857 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a4Q60857 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Slc6a4Q60857 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a4Q60857 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Slc6a4Q60857 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Slc6a4Q60857 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a4Q60857 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a4Q60857 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a4Q60857 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a4Q60857 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a4Q60857 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Slc6a4Q60857 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.67□□□□□ -0.38
Slc6a4Q60857 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a4Q60857 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.67□□□□□ -0.38
Slc6a4Q60857 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.67□□□□□ -0.38
Slc6a4Q60857 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a4Q60857 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Slc6a4Q60857 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Slc6a4Q60857 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Slc6a4Q60857 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a4Q60857 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a4Q60857 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a4Q60857 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Slc6a4Q60857 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.67□□□□□ -0.38
Slc6a4Q60857 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms