Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Satb1Q60611 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Satb1Q60611 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Satb1Q60611 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Satb1Q60611 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Satb1Q60611 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Satb1Q60611 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Satb1Q60611 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Satb1Q60611 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Satb1Q60611 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Satb1Q60611 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Satb1Q60611 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Satb1Q60611 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Satb1Q60611 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Satb1Q60611 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Satb1Q60611 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Satb1Q60611 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Satb1Q60611 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.93□□□□□ -0.34
Satb1Q60611 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Satb1Q60611 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Satb1Q60611 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Satb1Q60611 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Satb1Q60611 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Satb1Q60611 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Satb1Q60611 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Satb1Q60611 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.93□□□□□ -0.34
Satb1Q60611 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Satb1Q60611 Gm13296-201ENSMUST00000117854 997 ntBASIC12.93□□□□□ -0.34
Satb1Q60611 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.93□□□□□ -0.34
Satb1Q60611 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Satb1Q60611 Gm38210-201ENSMUST00000191944 809 ntBASIC12.93□□□□□ -0.34
Satb1Q60611 Gm8365-201ENSMUST00000197334 648 ntBASIC12.93□□□□□ -0.34
Satb1Q60611 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Satb1Q60611 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Satb1Q60611 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Satb1Q60611 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Satb1Q60611 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Satb1Q60611 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Satb1Q60611 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Satb1Q60611 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Satb1Q60611 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Satb1Q60611 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Satb1Q60611 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Satb1Q60611 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Satb1Q60611 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Satb1Q60611 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Satb1Q60611 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Satb1Q60611 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Satb1Q60611 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Satb1Q60611 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.93□□□□□ -0.34
Satb1Q60611 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Satb1Q60611 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.92□□□□□ -0.34
Satb1Q60611 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Satb1Q60611 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Satb1Q60611 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Satb1Q60611 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Satb1Q60611 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.92□□□□□ -0.34
Satb1Q60611 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.92□□□□□ -0.34
Satb1Q60611 Gm7003-201ENSMUST00000195089 312 ntBASIC12.92□□□□□ -0.34
Satb1Q60611 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.92□□□□□ -0.34
Satb1Q60611 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.92□□□□□ -0.34
Satb1Q60611 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.92□□□□□ -0.34
Satb1Q60611 Gm8712-201ENSMUST00000221090 701 ntBASIC12.92□□□□□ -0.34
Satb1Q60611 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.92□□□□□ -0.34
Satb1Q60611 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.92□□□□□ -0.34
Satb1Q60611 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Satb1Q60611 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms