Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Dopey2-207ENSMUST00000227156 7340 ntBASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Gm9630-201ENSMUST00000178304 885 ntBASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Gm3436-201ENSMUST00000179930 840 ntBASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Gm27525-201ENSMUST00000184465 107 ntBASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Gm28630-201ENSMUST00000187806 498 ntBASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Gm10766-202ENSMUST00000194123 606 ntBASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Gm42913-201ENSMUST00000197936 1853 ntBASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Mir449b-201ENSMUST00000104833 80 ntBASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Gm6415-201ENSMUST00000118488 348 ntBASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Gm11557-201ENSMUST00000120200 1008 ntBASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Gm13385-201ENSMUST00000121089 220 ntBASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Gm8927-201ENSMUST00000181978 981 ntBASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Gm27622-201ENSMUST00000183779 60 ntBASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Gm45841-201ENSMUST00000207700 164 ntBASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 AC138604.1-201ENSMUST00000226969 739 ntBASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Gm3222-201ENSMUST00000071282 990 ntBASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3-3Q5R1C3 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms