Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim41Q5NCC3 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trim41Q5NCC3 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
Trim41Q5NCC3 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim41Q5NCC3 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim41Q5NCC3 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim41Q5NCC3 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim41Q5NCC3 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim41Q5NCC3 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC21.54■■□□□ 1.04
Trim41Q5NCC3 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC21.54■■□□□ 1.04
Trim41Q5NCC3 Gm42511-201ENSMUST00000196160 234 ntBASIC21.54■■□□□ 1.04
Trim41Q5NCC3 Gm45120-201ENSMUST00000208880 408 ntBASIC21.54■■□□□ 1.04
Trim41Q5NCC3 Gm18204-201ENSMUST00000209835 793 ntBASIC21.54■■□□□ 1.04
Trim41Q5NCC3 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC21.54■■□□□ 1.04
Trim41Q5NCC3 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC21.54■■□□□ 1.04
Trim41Q5NCC3 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim41Q5NCC3 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim41Q5NCC3 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim41Q5NCC3 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Trim41Q5NCC3 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim41Q5NCC3 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Trim41Q5NCC3 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim41Q5NCC3 AC238940.1-201ENSMUST00000225106 1858 ntBASIC21.54■■□□□ 1.04
Trim41Q5NCC3 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim41Q5NCC3 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Trim41Q5NCC3 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim41Q5NCC3 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim41Q5NCC3 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim41Q5NCC3 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Trim41Q5NCC3 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim41Q5NCC3 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Trim41Q5NCC3 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim41Q5NCC3 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Trim41Q5NCC3 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim41Q5NCC3 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC21.53■■□□□ 1.04
Trim41Q5NCC3 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trim41Q5NCC3 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim41Q5NCC3 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Trim41Q5NCC3 Gm11989-201ENSMUST00000117240 672 ntBASIC21.53■■□□□ 1.04
Trim41Q5NCC3 Gm11362-201ENSMUST00000118838 850 ntBASIC21.53■■□□□ 1.04
Trim41Q5NCC3 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trim41Q5NCC3 Gm28071-201ENSMUST00000190355 478 ntBASIC21.53■■□□□ 1.04
Trim41Q5NCC3 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC21.53■■□□□ 1.04
Trim41Q5NCC3 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim41Q5NCC3 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim41Q5NCC3 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim41Q5NCC3 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim41Q5NCC3 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trim41Q5NCC3 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trim41Q5NCC3 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC21.53■■□□□ 1.04
Trim41Q5NCC3 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim41Q5NCC3 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
Trim41Q5NCC3 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim41Q5NCC3 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim41Q5NCC3 Gm45638-201ENSMUST00000211507 2878 ntBASIC21.53■■□□□ 1.04
Trim41Q5NCC3 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim41Q5NCC3 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim41Q5NCC3 Gm6198-201ENSMUST00000191337 2929 ntBASIC21.52■■□□□ 1.04
Trim41Q5NCC3 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Trim41Q5NCC3 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim41Q5NCC3 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC21.52■■□□□ 1.04
Trim41Q5NCC3 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC21.52■■□□□ 1.04
Trim41Q5NCC3 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Trim41Q5NCC3 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim41Q5NCC3 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Trim41Q5NCC3 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Trim41Q5NCC3 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC21.52■■□□□ 1.04
Trim41Q5NCC3 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC21.52■■□□□ 1.04
Trim41Q5NCC3 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim41Q5NCC3 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim41Q5NCC3 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC21.52■■□□□ 1.04
Trim41Q5NCC3 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
Trim41Q5NCC3 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC21.52■■□□□ 1.04
Trim41Q5NCC3 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC21.52■■□□□ 1.04
Trim41Q5NCC3 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC21.52■■□□□ 1.04
Trim41Q5NCC3 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Trim41Q5NCC3 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim41Q5NCC3 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
Trim41Q5NCC3 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim41Q5NCC3 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim41Q5NCC3 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC21.51■■□□□ 1.03
Trim41Q5NCC3 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim41Q5NCC3 Gm3052-202ENSMUST00000188254 2224 ntBASIC21.51■■□□□ 1.03
Trim41Q5NCC3 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim41Q5NCC3 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim41Q5NCC3 Gm15515-201ENSMUST00000117827 822 ntBASIC21.51■■□□□ 1.03
Trim41Q5NCC3 Gm12943-201ENSMUST00000119616 210 ntBASIC21.51■■□□□ 1.03
Trim41Q5NCC3 Gm12899-201ENSMUST00000120565 551 ntBASIC21.51■■□□□ 1.03
Trim41Q5NCC3 Gm6039-201ENSMUST00000121667 1250 ntBASIC21.51■■□□□ 1.03
Trim41Q5NCC3 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC21.51■■□□□ 1.03
Trim41Q5NCC3 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim41Q5NCC3 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim41Q5NCC3 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim41Q5NCC3 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC21.51■■□□□ 1.03
Trim41Q5NCC3 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trim41Q5NCC3 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trim41Q5NCC3 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trim41Q5NCC3 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim41Q5NCC3 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim41Q5NCC3 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms