Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28047Q3US59 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.09□□□□□ -0.15
Gm28047Q3US59 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28047Q3US59 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Gm28047Q3US59 AC154517.2-201ENSMUST00000220829 2458 ntBASIC14.09□□□□□ -0.15
Gm28047Q3US59 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gm28047Q3US59 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gm28047Q3US59 Gm44806-201ENSMUST00000205574 2303 ntBASIC14.08□□□□□ -0.16
Gm28047Q3US59 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28047Q3US59 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28047Q3US59 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Gm28047Q3US59 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Gm28047Q3US59 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28047Q3US59 Gm12058-201ENSMUST00000118614 437 ntBASIC14.08□□□□□ -0.16
Gm28047Q3US59 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Gm28047Q3US59 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.08□□□□□ -0.16
Gm28047Q3US59 Gm8494-201ENSMUST00000178171 1233 ntBASIC14.08□□□□□ -0.16
Gm28047Q3US59 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC14.08□□□□□ -0.16
Gm28047Q3US59 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.08□□□□□ -0.16
Gm28047Q3US59 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28047Q3US59 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28047Q3US59 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.08□□□□□ -0.16
Gm28047Q3US59 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Gm28047Q3US59 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28047Q3US59 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Gm28047Q3US59 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.08□□□□□ -0.16
Gm28047Q3US59 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Gm28047Q3US59 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Gm28047Q3US59 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Gm28047Q3US59 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28047Q3US59 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Gm28047Q3US59 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28047Q3US59 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28047Q3US59 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28047Q3US59 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28047Q3US59 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.08□□□□□ -0.16
Gm28047Q3US59 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Gm28047Q3US59 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28047Q3US59 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28047Q3US59 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28047Q3US59 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28047Q3US59 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28047Q3US59 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28047Q3US59 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28047Q3US59 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28047Q3US59 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28047Q3US59 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28047Q3US59 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Gm28047Q3US59 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28047Q3US59 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Gm28047Q3US59 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28047Q3US59 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28047Q3US59 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.07□□□□□ -0.16
Gm28047Q3US59 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28047Q3US59 Gm2606-201ENSMUST00000100754 1002 ntBASIC14.07□□□□□ -0.16
Gm28047Q3US59 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC14.07□□□□□ -0.16
Gm28047Q3US59 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28047Q3US59 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.07□□□□□ -0.16
Gm28047Q3US59 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.07□□□□□ -0.16
Gm28047Q3US59 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28047Q3US59 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.07□□□□□ -0.16
Gm28047Q3US59 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms