Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Treml4Q3LRV9 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Treml4Q3LRV9 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Treml4Q3LRV9 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Treml4Q3LRV9 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Treml4Q3LRV9 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Treml4Q3LRV9 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.72□□□□□ -0.53
Treml4Q3LRV9 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.72□□□□□ -0.53
Treml4Q3LRV9 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.72□□□□□ -0.53
Treml4Q3LRV9 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Treml4Q3LRV9 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Treml4Q3LRV9 Gm20426-201ENSMUST00000173657 440 ntBASIC11.72□□□□□ -0.53
Treml4Q3LRV9 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Treml4Q3LRV9 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.72□□□□□ -0.53
Treml4Q3LRV9 Gm32999-201ENSMUST00000192693 562 ntBASIC11.72□□□□□ -0.53
Treml4Q3LRV9 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Treml4Q3LRV9 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.72□□□□□ -0.53
Treml4Q3LRV9 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.72□□□□□ -0.53
Treml4Q3LRV9 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.72□□□□□ -0.53
Treml4Q3LRV9 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.72□□□□□ -0.53
Treml4Q3LRV9 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.72□□□□□ -0.53
Treml4Q3LRV9 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.72□□□□□ -0.53
Treml4Q3LRV9 Gm6991-201ENSMUST00000218475 1178 ntBASIC11.72□□□□□ -0.53
Treml4Q3LRV9 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.72□□□□□ -0.53
Treml4Q3LRV9 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Treml4Q3LRV9 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Treml4Q3LRV9 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Treml4Q3LRV9 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Treml4Q3LRV9 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Treml4Q3LRV9 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Treml4Q3LRV9 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Treml4Q3LRV9 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Treml4Q3LRV9 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Treml4Q3LRV9 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Treml4Q3LRV9 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Treml4Q3LRV9 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.72□□□□□ -0.53
Treml4Q3LRV9 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Treml4Q3LRV9 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Treml4Q3LRV9 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Treml4Q3LRV9 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Treml4Q3LRV9 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Treml4Q3LRV9 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Treml4Q3LRV9 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Treml4Q3LRV9 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Treml4Q3LRV9 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Treml4Q3LRV9 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Treml4Q3LRV9 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Treml4Q3LRV9 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Treml4Q3LRV9 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Treml4Q3LRV9 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Treml4Q3LRV9 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.71□□□□□ -0.53
Treml4Q3LRV9 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Treml4Q3LRV9 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Treml4Q3LRV9 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Treml4Q3LRV9 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Treml4Q3LRV9 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Treml4Q3LRV9 Gm12015-201ENSMUST00000117065 843 ntBASIC11.71□□□□□ -0.53
Treml4Q3LRV9 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.71□□□□□ -0.53
Treml4Q3LRV9 Gm9062-201ENSMUST00000117712 727 ntBASIC11.71□□□□□ -0.53
Treml4Q3LRV9 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.71□□□□□ -0.53
Treml4Q3LRV9 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.71□□□□□ -0.53
Treml4Q3LRV9 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.71□□□□□ -0.53
Treml4Q3LRV9 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Treml4Q3LRV9 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Treml4Q3LRV9 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.71□□□□□ -0.53
Treml4Q3LRV9 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Treml4Q3LRV9 Gm9211-201ENSMUST00000182882 975 ntBASIC11.71□□□□□ -0.53
Treml4Q3LRV9 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Treml4Q3LRV9 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Treml4Q3LRV9 AU022133-201ENSMUST00000200601 873 ntBASIC11.71□□□□□ -0.53
Treml4Q3LRV9 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.71□□□□□ -0.53
Treml4Q3LRV9 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Treml4Q3LRV9 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Treml4Q3LRV9 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Treml4Q3LRV9 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.71□□□□□ -0.54
Treml4Q3LRV9 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Treml4Q3LRV9 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Treml4Q3LRV9 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Treml4Q3LRV9 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Treml4Q3LRV9 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Treml4Q3LRV9 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Treml4Q3LRV9 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Treml4Q3LRV9 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Treml4Q3LRV9 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Treml4Q3LRV9 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Treml4Q3LRV9 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Treml4Q3LRV9 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Treml4Q3LRV9 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Treml4Q3LRV9 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Treml4Q3LRV9 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Treml4Q3LRV9 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Treml4Q3LRV9 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Treml4Q3LRV9 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Treml4Q3LRV9 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Treml4Q3LRV9 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Treml4Q3LRV9 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Treml4Q3LRV9 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Treml4Q3LRV9 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Treml4Q3LRV9 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Treml4Q3LRV9 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms