Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rab42Q0PD08 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rab42Q0PD08 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rab42Q0PD08 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rab42Q0PD08 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rab42Q0PD08 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rab42Q0PD08 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rab42Q0PD08 Gm43963-201ENSMUST00000203466 2488 ntBASIC11□□□□□ -0.65
Rab42Q0PD08 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rab42Q0PD08 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Rab42Q0PD08 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rab42Q0PD08 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11□□□□□ -0.65
Rab42Q0PD08 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rab42Q0PD08 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Rab42Q0PD08 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rab42Q0PD08 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Rab42Q0PD08 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rab42Q0PD08 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rab42Q0PD08 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Rab42Q0PD08 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rab42Q0PD08 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11□□□□□ -0.65
Rab42Q0PD08 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11□□□□□ -0.65
Rab42Q0PD08 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11□□□□□ -0.65
Rab42Q0PD08 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11□□□□□ -0.65
Rab42Q0PD08 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11□□□□□ -0.65
Rab42Q0PD08 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rab42Q0PD08 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rab42Q0PD08 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rab42Q0PD08 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11□□□□□ -0.65
Rab42Q0PD08 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rab42Q0PD08 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Rab42Q0PD08 AC238811.3-201ENSMUST00000225422 709 ntBASIC11□□□□□ -0.65
Rab42Q0PD08 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rab42Q0PD08 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11□□□□□ -0.65
Rab42Q0PD08 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11□□□□□ -0.65
Rab42Q0PD08 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rab42Q0PD08 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rab42Q0PD08 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Rab42Q0PD08 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rab42Q0PD08 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rab42Q0PD08 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rab42Q0PD08 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rab42Q0PD08 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rab42Q0PD08 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Rab42Q0PD08 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11□□□□□ -0.65
Rab42Q0PD08 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11□□□□□ -0.65
Rab42Q0PD08 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rab42Q0PD08 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rab42Q0PD08 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rab42Q0PD08 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Rab42Q0PD08 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rab42Q0PD08 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rab42Q0PD08 Gm45089-201ENSMUST00000208082 2040 ntBASIC10.99□□□□□ -0.65
Rab42Q0PD08 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rab42Q0PD08 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.99□□□□□ -0.65
Rab42Q0PD08 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rab42Q0PD08 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rab42Q0PD08 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC10.99□□□□□ -0.65
Rab42Q0PD08 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
Rab42Q0PD08 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rab42Q0PD08 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rab42Q0PD08 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.99□□□□□ -0.65
Rab42Q0PD08 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rab42Q0PD08 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC10.99□□□□□ -0.65
Rab42Q0PD08 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC10.99□□□□□ -0.65
Rab42Q0PD08 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.99□□□□□ -0.65
Rab42Q0PD08 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rab42Q0PD08 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Rab42Q0PD08 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.99□□□□□ -0.65
Rab42Q0PD08 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.99□□□□□ -0.65
Rab42Q0PD08 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Rab42Q0PD08 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC10.99□□□□□ -0.65
Rab42Q0PD08 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.99□□□□□ -0.65
Rab42Q0PD08 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC10.99□□□□□ -0.65
Rab42Q0PD08 CT573086.1-201ENSMUST00000227202 1074 ntBASIC10.99□□□□□ -0.65
Rab42Q0PD08 AC134335.2-201ENSMUST00000227660 440 ntBASIC10.99□□□□□ -0.65
Rab42Q0PD08 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Rab42Q0PD08 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rab42Q0PD08 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Rab42Q0PD08 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rab42Q0PD08 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rab42Q0PD08 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rab42Q0PD08 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rab42Q0PD08 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
Rab42Q0PD08 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rab42Q0PD08 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Rab42Q0PD08 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rab42Q0PD08 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rab42Q0PD08 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rab42Q0PD08 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Rab42Q0PD08 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Rab42Q0PD08 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.99□□□□□ -0.65
Rab42Q0PD08 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rab42Q0PD08 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rab42Q0PD08 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rab42Q0PD08 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rab42Q0PD08 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 103.5 ms