Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Tff1Q08423 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
Tff1Q08423 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Tff1Q08423 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Tff1Q08423 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Tff1Q08423 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC10.32□□□□□ -0.76
Tff1Q08423 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Tff1Q08423 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Gm27516-201ENSMUST00000184237 98 ntBASIC10.32□□□□□ -0.76
Tff1Q08423 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Gm44364-201ENSMUST00000198368 141 ntBASIC10.32□□□□□ -0.76
Tff1Q08423 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC10.32□□□□□ -0.76
Tff1Q08423 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Tff1Q08423 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Tff1Q08423 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Tff1Q08423 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Tff1Q08423 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Tff1Q08423 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.32□□□□□ -0.76
Tff1Q08423 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
Tff1Q08423 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Tff1Q08423 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Tff1Q08423 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.31□□□□□ -0.76
Tff1Q08423 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tff1Q08423 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Tff1Q08423 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tff1Q08423 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tff1Q08423 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Tff1Q08423 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Tff1Q08423 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tff1Q08423 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Tff1Q08423 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Tff1Q08423 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC10.31□□□□□ -0.76
Tff1Q08423 Gm15236-201ENSMUST00000117309 379 ntBASIC10.31□□□□□ -0.76
Tff1Q08423 Gm13369-201ENSMUST00000119442 987 ntBASIC10.31□□□□□ -0.76
Tff1Q08423 Gm12291-201ENSMUST00000121627 311 ntBASIC10.31□□□□□ -0.76
Tff1Q08423 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Tff1Q08423 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tff1Q08423 Gm8810-201ENSMUST00000172895 754 ntBASIC10.31□□□□□ -0.76
Tff1Q08423 Proscos-202ENSMUST00000178990 666 ntBASIC10.31□□□□□ -0.76
Tff1Q08423 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Tff1Q08423 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Tff1Q08423 Gm37466-201ENSMUST00000195692 652 ntBASIC10.31□□□□□ -0.76
Tff1Q08423 Ighv8-10-201ENSMUST00000199579 358 ntBASIC10.31□□□□□ -0.76
Tff1Q08423 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Tff1Q08423 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.31□□□□□ -0.76
Tff1Q08423 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
Tff1Q08423 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Tff1Q08423 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.31□□□□□ -0.76
Tff1Q08423 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.31□□□□□ -0.76
Tff1Q08423 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Tff1Q08423 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tff1Q08423 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Tff1Q08423 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tff1Q08423 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Tff1Q08423 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tff1Q08423 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Tff1Q08423 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.31□□□□□ -0.76
Tff1Q08423 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Tff1Q08423 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Tff1Q08423 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tff1Q08423 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.31□□□□□ -0.76
Tff1Q08423 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tff1Q08423 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tff1Q08423 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.31□□□□□ -0.76
Tff1Q08423 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Tff1Q08423 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tff1Q08423 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tff1Q08423 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tff1Q08423 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
Tff1Q08423 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.31□□□□□ -0.76
Tff1Q08423 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms