Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox4Q06831 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.21□□□□□ -0.46
Sox4Q06831 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox4Q06831 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox4Q06831 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox4Q06831 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox4Q06831 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox4Q06831 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Sox4Q06831 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.2□□□□□ -0.46
Sox4Q06831 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox4Q06831 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox4Q06831 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox4Q06831 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.2□□□□□ -0.46
Sox4Q06831 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox4Q06831 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.2□□□□□ -0.46
Sox4Q06831 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.2□□□□□ -0.46
Sox4Q06831 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox4Q06831 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox4Q06831 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox4Q06831 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox4Q06831 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox4Q06831 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox4Q06831 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox4Q06831 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.2□□□□□ -0.46
Sox4Q06831 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox4Q06831 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox4Q06831 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox4Q06831 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox4Q06831 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.2□□□□□ -0.46
Sox4Q06831 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Sox4Q06831 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.2□□□□□ -0.46
Sox4Q06831 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox4Q06831 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox4Q06831 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.2□□□□□ -0.46
Sox4Q06831 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Sox4Q06831 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox4Q06831 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox4Q06831 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox4Q06831 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox4Q06831 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox4Q06831 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox4Q06831 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox4Q06831 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox4Q06831 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox4Q06831 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox4Q06831 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox4Q06831 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.19□□□□□ -0.46
Sox4Q06831 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox4Q06831 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sox4Q06831 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox4Q06831 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox4Q06831 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sox4Q06831 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox4Q06831 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sox4Q06831 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox4Q06831 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox4Q06831 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox4Q06831 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox4Q06831 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.19□□□□□ -0.46
Sox4Q06831 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox4Q06831 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox4Q06831 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox4Q06831 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Sox4Q06831 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.19□□□□□ -0.46
Sox4Q06831 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Sox4Q06831 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Sox4Q06831 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.19□□□□□ -0.46
Sox4Q06831 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.19□□□□□ -0.46
Sox4Q06831 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Sox4Q06831 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox4Q06831 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.19□□□□□ -0.46
Sox4Q06831 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Sox4Q06831 Gm26083-201ENSMUST00000157904 193 ntBASIC12.19□□□□□ -0.46
Sox4Q06831 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.19□□□□□ -0.46
Sox4Q06831 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox4Q06831 Gm27046-201ENSMUST00000182160 463 ntBASIC12.19□□□□□ -0.46
Sox4Q06831 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox4Q06831 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.19□□□□□ -0.46
Sox4Q06831 Gm44958-201ENSMUST00000203734 736 ntBASIC12.19□□□□□ -0.46
Sox4Q06831 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sox4Q06831 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.19□□□□□ -0.46
Sox4Q06831 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox4Q06831 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox4Q06831 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox4Q06831 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox4Q06831 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox4Q06831 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox4Q06831 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox4Q06831 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sox4Q06831 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox4Q06831 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox4Q06831 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox4Q06831 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Sox4Q06831 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox4Q06831 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox4Q06831 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox4Q06831 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sox4Q06831 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox4Q06831 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox4Q06831 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms