Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scn1bP97952 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.33□□□□□ -0.6
Scn1bP97952 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scn1bP97952 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.33□□□□□ -0.6
Scn1bP97952 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scn1bP97952 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Scn1bP97952 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.33□□□□□ -0.6
Scn1bP97952 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.33□□□□□ -0.6
Scn1bP97952 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.33□□□□□ -0.6
Scn1bP97952 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Scn1bP97952 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Scn1bP97952 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Scn1bP97952 Gm27306-201ENSMUST00000183970 107 ntBASIC11.33□□□□□ -0.6
Scn1bP97952 Mir8102-201ENSMUST00000184148 139 ntBASIC11.33□□□□□ -0.6
Scn1bP97952 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.33□□□□□ -0.6
Scn1bP97952 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Scn1bP97952 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.33□□□□□ -0.6
Scn1bP97952 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Scn1bP97952 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Scn1bP97952 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scn1bP97952 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Scn1bP97952 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Scn1bP97952 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.33□□□□□ -0.6
Scn1bP97952 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scn1bP97952 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.33□□□□□ -0.6
Scn1bP97952 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.33□□□□□ -0.6
Scn1bP97952 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scn1bP97952 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scn1bP97952 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scn1bP97952 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scn1bP97952 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Scn1bP97952 BC043934-202ENSMUST00000185694 2356 ntBASIC11.33□□□□□ -0.6
Scn1bP97952 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scn1bP97952 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scn1bP97952 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Scn1bP97952 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Scn1bP97952 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Scn1bP97952 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.33□□□□□ -0.6
Scn1bP97952 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scn1bP97952 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Scn1bP97952 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scn1bP97952 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.32□□□□□ -0.6
Scn1bP97952 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Scn1bP97952 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Scn1bP97952 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Scn1bP97952 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.32□□□□□ -0.6
Scn1bP97952 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.32□□□□□ -0.6
Scn1bP97952 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scn1bP97952 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.32□□□□□ -0.6
Scn1bP97952 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scn1bP97952 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scn1bP97952 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scn1bP97952 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scn1bP97952 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Scn1bP97952 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scn1bP97952 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scn1bP97952 Gm15487-201ENSMUST00000122373 465 ntBASIC11.32□□□□□ -0.6
Scn1bP97952 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Scn1bP97952 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Scn1bP97952 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.32□□□□□ -0.6
Scn1bP97952 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.32□□□□□ -0.6
Scn1bP97952 Gm24447-201ENSMUST00000083977 338 ntBASIC11.32□□□□□ -0.6
Scn1bP97952 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scn1bP97952 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scn1bP97952 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Scn1bP97952 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Scn1bP97952 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scn1bP97952 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scn1bP97952 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Scn1bP97952 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Scn1bP97952 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scn1bP97952 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scn1bP97952 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Scn1bP97952 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Scn1bP97952 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.32□□□□□ -0.6
Scn1bP97952 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scn1bP97952 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Scn1bP97952 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Scn1bP97952 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scn1bP97952 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Scn1bP97952 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.32□□□□□ -0.6
Scn1bP97952 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scn1bP97952 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.32□□□□□ -0.6
Scn1bP97952 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scn1bP97952 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scn1bP97952 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Scn1bP97952 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.31□□□□□ -0.6
Scn1bP97952 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scn1bP97952 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scn1bP97952 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Scn1bP97952 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Scn1bP97952 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scn1bP97952 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scn1bP97952 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Scn1bP97952 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scn1bP97952 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Scn1bP97952 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scn1bP97952 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Scn1bP97952 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Scn1bP97952 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms