Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh6P97326 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh6P97326 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh6P97326 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh6P97326 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh6P97326 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh6P97326 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh6P97326 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
Cdh6P97326 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh6P97326 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh6P97326 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh6P97326 Gm14832-201ENSMUST00000121289 322 ntBASIC12.55□□□□□ -0.4
Cdh6P97326 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh6P97326 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cdh6P97326 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh6P97326 Mir8109-201ENSMUST00000184375 117 ntBASIC12.55□□□□□ -0.4
Cdh6P97326 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh6P97326 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh6P97326 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh6P97326 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh6P97326 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.55□□□□□ -0.4
Cdh6P97326 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh6P97326 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.55□□□□□ -0.4
Cdh6P97326 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh6P97326 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh6P97326 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Cdh6P97326 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh6P97326 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh6P97326 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh6P97326 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh6P97326 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh6P97326 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh6P97326 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh6P97326 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh6P97326 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.55□□□□□ -0.4
Cdh6P97326 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh6P97326 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh6P97326 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cdh6P97326 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh6P97326 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.55□□□□□ -0.4
Cdh6P97326 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh6P97326 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Cdh6P97326 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Cdh6P97326 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh6P97326 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh6P97326 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cdh6P97326 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh6P97326 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cdh6P97326 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh6P97326 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh6P97326 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.54□□□□□ -0.4
Cdh6P97326 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh6P97326 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh6P97326 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Cdh6P97326 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdh6P97326 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Cdh6P97326 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Cdh6P97326 Gm24934-201ENSMUST00000103764 111 ntBASIC12.54□□□□□ -0.4
Cdh6P97326 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh6P97326 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdh6P97326 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh6P97326 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh6P97326 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh6P97326 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh6P97326 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
Cdh6P97326 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cdh6P97326 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh6P97326 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh6P97326 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.54□□□□□ -0.4
Cdh6P97326 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.54□□□□□ -0.4
Cdh6P97326 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.54□□□□□ -0.4
Cdh6P97326 Gm6334-201ENSMUST00000207083 228 ntBASIC12.54□□□□□ -0.4
Cdh6P97326 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.54□□□□□ -0.4
Cdh6P97326 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cdh6P97326 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.54□□□□□ -0.4
Cdh6P97326 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh6P97326 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.54□□□□□ -0.4
Cdh6P97326 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh6P97326 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cdh6P97326 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh6P97326 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh6P97326 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh6P97326 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh6P97326 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh6P97326 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh6P97326 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh6P97326 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh6P97326 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh6P97326 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh6P97326 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh6P97326 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.54□□□□□ -0.4
Cdh6P97326 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh6P97326 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cdh6P97326 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh6P97326 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh6P97326 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh6P97326 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh6P97326 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.54□□□□□ -0.4
Cdh6P97326 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh6P97326 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms