Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smad1P70340 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.8□□□□□ -0.36
Smad1P70340 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smad1P70340 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smad1P70340 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smad1P70340 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smad1P70340 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smad1P70340 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.8□□□□□ -0.36
Smad1P70340 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Smad1P70340 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smad1P70340 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smad1P70340 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smad1P70340 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smad1P70340 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smad1P70340 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smad1P70340 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smad1P70340 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smad1P70340 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Smad1P70340 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smad1P70340 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smad1P70340 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Smad1P70340 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smad1P70340 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Smad1P70340 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smad1P70340 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smad1P70340 Gm14381-201ENSMUST00000122105 414 ntBASIC12.79□□□□□ -0.36
Smad1P70340 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.79□□□□□ -0.36
Smad1P70340 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.79□□□□□ -0.36
Smad1P70340 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.79□□□□□ -0.36
Smad1P70340 Gm7029-201ENSMUST00000173226 450 ntBASIC12.79□□□□□ -0.36
Smad1P70340 Gm10608-202ENSMUST00000213924 676 ntBASIC12.79□□□□□ -0.36
Smad1P70340 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smad1P70340 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smad1P70340 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smad1P70340 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smad1P70340 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smad1P70340 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smad1P70340 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smad1P70340 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Smad1P70340 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smad1P70340 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smad1P70340 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Smad1P70340 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Smad1P70340 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smad1P70340 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smad1P70340 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smad1P70340 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Smad1P70340 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smad1P70340 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Smad1P70340 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smad1P70340 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smad1P70340 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smad1P70340 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smad1P70340 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smad1P70340 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.79□□□□□ -0.36
Smad1P70340 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smad1P70340 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.79□□□□□ -0.36
Smad1P70340 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smad1P70340 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smad1P70340 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Smad1P70340 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smad1P70340 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.78□□□□□ -0.36
Smad1P70340 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smad1P70340 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Smad1P70340 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smad1P70340 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smad1P70340 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.78□□□□□ -0.36
Smad1P70340 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smad1P70340 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smad1P70340 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smad1P70340 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smad1P70340 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smad1P70340 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smad1P70340 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.78□□□□□ -0.36
Smad1P70340 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smad1P70340 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smad1P70340 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smad1P70340 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smad1P70340 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smad1P70340 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Smad1P70340 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Smad1P70340 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Smad1P70340 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Smad1P70340 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Smad1P70340 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Smad1P70340 Gm13813-201ENSMUST00000120998 787 ntBASIC12.78□□□□□ -0.36
Smad1P70340 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.78□□□□□ -0.36
Smad1P70340 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smad1P70340 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.78□□□□□ -0.36
Smad1P70340 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.78□□□□□ -0.36
Smad1P70340 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.78□□□□□ -0.36
Smad1P70340 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smad1P70340 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smad1P70340 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smad1P70340 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smad1P70340 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.78□□□□□ -0.36
Smad1P70340 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Smad1P70340 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smad1P70340 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smad1P70340 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms