Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Traf6P70196 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Traf6P70196 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Traf6P70196 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Traf6P70196 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Traf6P70196 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Traf6P70196 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Traf6P70196 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.24□□□□□ -0.45
Traf6P70196 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Traf6P70196 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Traf6P70196 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.24□□□□□ -0.45
Traf6P70196 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Traf6P70196 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Traf6P70196 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.24□□□□□ -0.45
Traf6P70196 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Traf6P70196 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Traf6P70196 Gm8502-201ENSMUST00000185708 901 ntBASIC12.24□□□□□ -0.45
Traf6P70196 Gm21147-201ENSMUST00000186046 913 ntBASIC12.24□□□□□ -0.45
Traf6P70196 Gm8510-201ENSMUST00000189202 895 ntBASIC12.24□□□□□ -0.45
Traf6P70196 Gm2316-201ENSMUST00000190613 921 ntBASIC12.24□□□□□ -0.45
Traf6P70196 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.24□□□□□ -0.45
Traf6P70196 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.24□□□□□ -0.45
Traf6P70196 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Traf6P70196 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.24□□□□□ -0.45
Traf6P70196 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Traf6P70196 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Traf6P70196 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Traf6P70196 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Traf6P70196 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Traf6P70196 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Traf6P70196 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Traf6P70196 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Traf6P70196 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Traf6P70196 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Traf6P70196 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Traf6P70196 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Traf6P70196 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Traf6P70196 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Traf6P70196 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Traf6P70196 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Traf6P70196 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Traf6P70196 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.24□□□□□ -0.45
Traf6P70196 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Traf6P70196 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Traf6P70196 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Traf6P70196 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Traf6P70196 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Traf6P70196 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Traf6P70196 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Traf6P70196 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Traf6P70196 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Traf6P70196 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Traf6P70196 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Traf6P70196 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Traf6P70196 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Traf6P70196 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Traf6P70196 Map1b-203ENSMUST00000223725 2669 ntBASIC12.24□□□□□ -0.45
Traf6P70196 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Traf6P70196 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Traf6P70196 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Traf6P70196 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Traf6P70196 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Traf6P70196 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Traf6P70196 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.23□□□□□ -0.45
Traf6P70196 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.23□□□□□ -0.45
Traf6P70196 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.23□□□□□ -0.45
Traf6P70196 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Traf6P70196 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Traf6P70196 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Traf6P70196 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.23□□□□□ -0.45
Traf6P70196 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Traf6P70196 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.23□□□□□ -0.45
Traf6P70196 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Traf6P70196 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Traf6P70196 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.23□□□□□ -0.45
Traf6P70196 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Traf6P70196 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.23□□□□□ -0.45
Traf6P70196 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Traf6P70196 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Traf6P70196 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Traf6P70196 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.23□□□□□ -0.45
Traf6P70196 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.23□□□□□ -0.45
Traf6P70196 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.23□□□□□ -0.45
Traf6P70196 Gm27847-201ENSMUST00000183711 107 ntBASIC12.23□□□□□ -0.45
Traf6P70196 Gm27375-201ENSMUST00000183799 107 ntBASIC12.23□□□□□ -0.45
Traf6P70196 Gm18515-201ENSMUST00000219755 797 ntBASIC12.23□□□□□ -0.45
Traf6P70196 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC12.23□□□□□ -0.45
Traf6P70196 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Traf6P70196 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Traf6P70196 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Traf6P70196 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Traf6P70196 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Traf6P70196 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Traf6P70196 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Traf6P70196 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Traf6P70196 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Traf6P70196 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Traf6P70196 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Traf6P70196 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Traf6P70196 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms