Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ybx1P62960 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ybx1P62960 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ybx1P62960 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Ybx1P62960 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.7□□□□□ -0.38
Ybx1P62960 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.7□□□□□ -0.38
Ybx1P62960 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ybx1P62960 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ybx1P62960 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ybx1P62960 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ybx1P62960 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ybx1P62960 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.69□□□□□ -0.38
Ybx1P62960 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ybx1P62960 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ybx1P62960 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ybx1P62960 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ybx1P62960 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ybx1P62960 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ybx1P62960 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ybx1P62960 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ybx1P62960 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.69□□□□□ -0.38
Ybx1P62960 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ybx1P62960 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ybx1P62960 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ybx1P62960 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ybx1P62960 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ybx1P62960 Gm11989-201ENSMUST00000117240 672 ntBASIC12.69□□□□□ -0.38
Ybx1P62960 Gm11362-201ENSMUST00000118838 850 ntBASIC12.69□□□□□ -0.38
Ybx1P62960 Gm11434-201ENSMUST00000122379 629 ntBASIC12.69□□□□□ -0.38
Ybx1P62960 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.69□□□□□ -0.38
Ybx1P62960 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ybx1P62960 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.69□□□□□ -0.38
Ybx1P62960 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ybx1P62960 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.69□□□□□ -0.38
Ybx1P62960 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ybx1P62960 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.69□□□□□ -0.38
Ybx1P62960 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ybx1P62960 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ybx1P62960 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
Ybx1P62960 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ybx1P62960 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ybx1P62960 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ybx1P62960 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ybx1P62960 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ybx1P62960 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Ybx1P62960 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ybx1P62960 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ybx1P62960 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.69□□□□□ -0.38
Ybx1P62960 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ybx1P62960 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ybx1P62960 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ybx1P62960 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ybx1P62960 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ybx1P62960 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ybx1P62960 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ybx1P62960 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ybx1P62960 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ybx1P62960 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ybx1P62960 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.68□□□□□ -0.38
Ybx1P62960 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ybx1P62960 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.68□□□□□ -0.38
Ybx1P62960 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.68□□□□□ -0.38
Ybx1P62960 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.68□□□□□ -0.38
Ybx1P62960 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ybx1P62960 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ybx1P62960 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ybx1P62960 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.68□□□□□ -0.38
Ybx1P62960 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ybx1P62960 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.68□□□□□ -0.38
Ybx1P62960 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.68□□□□□ -0.38
Ybx1P62960 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ybx1P62960 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ybx1P62960 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ybx1P62960 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ybx1P62960 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.68□□□□□ -0.38
Ybx1P62960 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.68□□□□□ -0.38
Ybx1P62960 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.68□□□□□ -0.38
Ybx1P62960 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.68□□□□□ -0.38
Ybx1P62960 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ybx1P62960 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ybx1P62960 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ybx1P62960 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ybx1P62960 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.68□□□□□ -0.38
Ybx1P62960 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ybx1P62960 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ybx1P62960 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ybx1P62960 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ybx1P62960 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ybx1P62960 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ybx1P62960 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ybx1P62960 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ybx1P62960 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ybx1P62960 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ybx1P62960 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ybx1P62960 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ybx1P62960 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ybx1P62960 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ybx1P62960 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ybx1P62960 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ybx1P62960 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms