Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm6P62313 Gm27023-201ENSMUST00000182372 285 ntBASIC10.9□□□□□ -0.66
Lsm6P62313 Gm37008-201ENSMUST00000195712 319 ntBASIC10.9□□□□□ -0.66
Lsm6P62313 Gm44882-201ENSMUST00000205702 802 ntBASIC10.9□□□□□ -0.66
Lsm6P62313 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm6P62313 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Lsm6P62313 Gm8227-201ENSMUST00000223306 571 ntBASIC10.9□□□□□ -0.66
Lsm6P62313 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm6P62313 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm6P62313 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm6P62313 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm6P62313 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm6P62313 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.9□□□□□ -0.66
Lsm6P62313 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Lsm6P62313 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Lsm6P62313 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Lsm6P62313 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Lsm6P62313 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Lsm6P62313 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.9□□□□□ -0.67
Lsm6P62313 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Lsm6P62313 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.9□□□□□ -0.67
Lsm6P62313 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Lsm6P62313 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Lsm6P62313 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.89□□□□□ -0.67
Lsm6P62313 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.89□□□□□ -0.67
Lsm6P62313 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm6P62313 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm6P62313 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.89□□□□□ -0.67
Lsm6P62313 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm6P62313 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm6P62313 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Lsm6P62313 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm6P62313 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.89□□□□□ -0.67
Lsm6P62313 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm6P62313 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm6P62313 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Lsm6P62313 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm6P62313 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC10.89□□□□□ -0.67
Lsm6P62313 Gm12058-201ENSMUST00000118614 437 ntBASIC10.89□□□□□ -0.67
Lsm6P62313 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.89□□□□□ -0.67
Lsm6P62313 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.89□□□□□ -0.67
Lsm6P62313 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.89□□□□□ -0.67
Lsm6P62313 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC10.89□□□□□ -0.67
Lsm6P62313 Gm9728-201ENSMUST00000200197 1055 ntBASIC10.89□□□□□ -0.67
Lsm6P62313 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.89□□□□□ -0.67
Lsm6P62313 Gm44958-201ENSMUST00000203734 736 ntBASIC10.89□□□□□ -0.67
Lsm6P62313 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm6P62313 Gm10076-201ENSMUST00000073238 384 ntBASIC10.89□□□□□ -0.67
Lsm6P62313 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm6P62313 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm6P62313 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm6P62313 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm6P62313 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm6P62313 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.89□□□□□ -0.67
Lsm6P62313 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Lsm6P62313 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.89□□□□□ -0.67
Lsm6P62313 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Lsm6P62313 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm6P62313 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm6P62313 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.89□□□□□ -0.67
Lsm6P62313 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm6P62313 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm6P62313 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.89□□□□□ -0.67
Lsm6P62313 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Lsm6P62313 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm6P62313 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm6P62313 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm6P62313 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm6P62313 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Lsm6P62313 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Lsm6P62313 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm6P62313 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm6P62313 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm6P62313 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Lsm6P62313 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm6P62313 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm6P62313 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm6P62313 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Lsm6P62313 Gm10434-201ENSMUST00000101158 471 ntBASIC10.88□□□□□ -0.67
Lsm6P62313 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm6P62313 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm6P62313 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm6P62313 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm6P62313 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.88□□□□□ -0.67
Lsm6P62313 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.88□□□□□ -0.67
Lsm6P62313 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm6P62313 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.88□□□□□ -0.67
Lsm6P62313 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm6P62313 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm6P62313 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.88□□□□□ -0.67
Lsm6P62313 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm6P62313 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm6P62313 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.88□□□□□ -0.67
Lsm6P62313 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.88□□□□□ -0.67
Lsm6P62313 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.88□□□□□ -0.67
Lsm6P62313 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.88□□□□□ -0.67
Lsm6P62313 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.88□□□□□ -0.67
Lsm6P62313 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.88□□□□□ -0.67
Lsm6P62313 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm6P62313 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms