Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup43P59235 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup43P59235 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup43P59235 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nup43P59235 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Nup43P59235 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Nup43P59235 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Nup43P59235 Olfr582-201ENSMUST00000098212 960 ntBASIC11.72□□□□□ -0.53
Nup43P59235 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup43P59235 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup43P59235 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup43P59235 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup43P59235 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.72□□□□□ -0.53
Nup43P59235 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup43P59235 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup43P59235 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup43P59235 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Nup43P59235 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup43P59235 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Nup43P59235 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nup43P59235 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup43P59235 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup43P59235 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Nup43P59235 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup43P59235 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nup43P59235 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup43P59235 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nup43P59235 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nup43P59235 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nup43P59235 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nup43P59235 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Nup43P59235 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nup43P59235 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nup43P59235 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nup43P59235 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nup43P59235 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nup43P59235 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nup43P59235 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nup43P59235 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nup43P59235 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nup43P59235 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.71□□□□□ -0.53
Nup43P59235 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nup43P59235 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nup43P59235 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nup43P59235 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nup43P59235 Gm14723-201ENSMUST00000118686 215 ntBASIC11.71□□□□□ -0.53
Nup43P59235 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.71□□□□□ -0.53
Nup43P59235 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nup43P59235 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nup43P59235 Gm23119-201ENSMUST00000158610 140 ntBASIC11.71□□□□□ -0.53
Nup43P59235 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.71□□□□□ -0.53
Nup43P59235 Gm3961-201ENSMUST00000204425 994 ntBASIC11.71□□□□□ -0.53
Nup43P59235 Gm21769-201ENSMUST00000211922 111 ntBASIC11.71□□□□□ -0.53
Nup43P59235 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nup43P59235 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nup43P59235 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nup43P59235 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nup43P59235 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.71□□□□□ -0.54
Nup43P59235 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nup43P59235 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nup43P59235 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.71□□□□□ -0.54
Nup43P59235 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Nup43P59235 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nup43P59235 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nup43P59235 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Nup43P59235 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nup43P59235 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nup43P59235 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nup43P59235 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nup43P59235 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.7□□□□□ -0.54
Nup43P59235 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nup43P59235 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nup43P59235 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nup43P59235 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Nup43P59235 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nup43P59235 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Nup43P59235 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.7□□□□□ -0.54
Nup43P59235 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Nup43P59235 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.7□□□□□ -0.54
Nup43P59235 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nup43P59235 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nup43P59235 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.7□□□□□ -0.54
Nup43P59235 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nup43P59235 Gm28882-201ENSMUST00000185504 314 ntBASIC11.7□□□□□ -0.54
Nup43P59235 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.7□□□□□ -0.54
Nup43P59235 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nup43P59235 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.7□□□□□ -0.54
Nup43P59235 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nup43P59235 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nup43P59235 AC132260.2-201ENSMUST00000224482 344 ntBASIC11.7□□□□□ -0.54
Nup43P59235 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.7□□□□□ -0.54
Nup43P59235 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nup43P59235 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.7□□□□□ -0.54
Nup43P59235 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nup43P59235 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.7□□□□□ -0.54
Nup43P59235 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Nup43P59235 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Nup43P59235 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Nup43P59235 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nup43P59235 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms