Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Tpm1P58771 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.82□□□□□ -0.2
Tpm1P58771 Gm16215-201ENSMUST00000161990 637 ntBASIC13.82□□□□□ -0.2
Tpm1P58771 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tpm1P58771 Gm23363-201ENSMUST00000175024 79 ntBASIC13.82□□□□□ -0.2
Tpm1P58771 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.82□□□□□ -0.2
Tpm1P58771 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Tpm1P58771 Mir7654-201ENSMUST00000185082 70 ntBASIC13.82□□□□□ -0.2
Tpm1P58771 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.82□□□□□ -0.2
Tpm1P58771 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.82□□□□□ -0.2
Tpm1P58771 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.82□□□□□ -0.2
Tpm1P58771 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Tpm1P58771 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Tpm1P58771 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tpm1P58771 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tpm1P58771 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tpm1P58771 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Tpm1P58771 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tpm1P58771 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tpm1P58771 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Tpm1P58771 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tpm1P58771 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Tpm1P58771 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Tpm1P58771 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tpm1P58771 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm1P58771 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm1P58771 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm1P58771 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm1P58771 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm1P58771 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm1P58771 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Tpm1P58771 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.81□□□□□ -0.2
Tpm1P58771 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm1P58771 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm1P58771 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Tpm1P58771 Gm14704-201ENSMUST00000120300 874 ntBASIC13.81□□□□□ -0.2
Tpm1P58771 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.81□□□□□ -0.2
Tpm1P58771 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.81□□□□□ -0.2
Tpm1P58771 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.81□□□□□ -0.2
Tpm1P58771 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.81□□□□□ -0.2
Tpm1P58771 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm1P58771 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm1P58771 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.81□□□□□ -0.2
Tpm1P58771 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.81□□□□□ -0.2
Tpm1P58771 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.81□□□□□ -0.2
Tpm1P58771 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm1P58771 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC13.81□□□□□ -0.2
Tpm1P58771 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Tpm1P58771 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm1P58771 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm1P58771 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm1P58771 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm1P58771 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm1P58771 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm1P58771 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC13.8□□□□□ -0.2
Tpm1P58771 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm1P58771 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm1P58771 Gm11618-201ENSMUST00000117946 267 ntBASIC13.8□□□□□ -0.2
Tpm1P58771 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm1P58771 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm1P58771 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.8□□□□□ -0.2
Tpm1P58771 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.8□□□□□ -0.2
Tpm1P58771 Gm8099-201ENSMUST00000200510 742 ntBASIC13.8□□□□□ -0.2
Tpm1P58771 Gm6218-201ENSMUST00000219812 628 ntBASIC13.8□□□□□ -0.2
Tpm1P58771 Gm8227-201ENSMUST00000223306 571 ntBASIC13.8□□□□□ -0.2
Tpm1P58771 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.8□□□□□ -0.2
Tpm1P58771 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm1P58771 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm1P58771 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm1P58771 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Tpm1P58771 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm1P58771 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm1P58771 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC13.8□□□□□ -0.2
Tpm1P58771 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm1P58771 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm1P58771 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm1P58771 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm1P58771 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm1P58771 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.8□□□□□ -0.2
Tpm1P58771 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm1P58771 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm1P58771 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Tpm1P58771 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm1P58771 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Tpm1P58771 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm1P58771 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm1P58771 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Tpm1P58771 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm1P58771 Gm37542-201ENSMUST00000192563 2832 ntBASIC13.79□□□□□ -0.2
Tpm1P58771 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Tpm1P58771 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Tpm1P58771 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm1P58771 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm1P58771 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm1P58771 Gm14057-201ENSMUST00000120631 482 ntBASIC13.79□□□□□ -0.2
Tpm1P58771 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.79□□□□□ -0.2
Tpm1P58771 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm1P58771 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.79□□□□□ -0.2
Tpm1P58771 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Tpm1P58771 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms