Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC13.95□□□□□ -0.18
Atoh1P48985 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Atoh1P48985 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Atoh1P48985 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Atoh1P48985 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Atoh1P48985 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Atoh1P48985 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Atoh1P48985 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Atoh1P48985 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Atoh1P48985 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Atoh1P48985 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Atoh1P48985 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.94□□□□□ -0.18
Atoh1P48985 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Atoh1P48985 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Atoh1P48985 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Atoh1P48985 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Atoh1P48985 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Atoh1P48985 Gm22920-201ENSMUST00000102175 109 ntBASIC13.94□□□□□ -0.18
Atoh1P48985 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Atoh1P48985 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Atoh1P48985 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Atoh1P48985 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC13.94□□□□□ -0.18
Atoh1P48985 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC13.94□□□□□ -0.18
Atoh1P48985 Gm13937-201ENSMUST00000121000 988 ntBASIC13.94□□□□□ -0.18
Atoh1P48985 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC13.94□□□□□ -0.18
Atoh1P48985 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Atoh1P48985 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Atoh1P48985 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC13.94□□□□□ -0.18
Atoh1P48985 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Atoh1P48985 Gm42657-201ENSMUST00000201746 211 ntBASIC13.94□□□□□ -0.18
Atoh1P48985 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Atoh1P48985 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Atoh1P48985 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
Atoh1P48985 AC173482.6-201ENSMUST00000225889 1741 ntBASIC13.94□□□□□ -0.18
Atoh1P48985 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Atoh1P48985 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Atoh1P48985 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC13.94□□□□□ -0.18
Atoh1P48985 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Atoh1P48985 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Atoh1P48985 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Atoh1P48985 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Atoh1P48985 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.94□□□□□ -0.18
Atoh1P48985 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Atoh1P48985 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC13.94□□□□□ -0.18
Atoh1P48985 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Atoh1P48985 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.94□□□□□ -0.18
Atoh1P48985 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Atoh1P48985 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Atoh1P48985 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Atoh1P48985 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Atoh1P48985 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Atoh1P48985 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Atoh1P48985 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Atoh1P48985 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Atoh1P48985 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Atoh1P48985 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Atoh1P48985 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Atoh1P48985 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Atoh1P48985 Gm13916-201ENSMUST00000117368 628 ntBASIC13.93□□□□□ -0.18
Atoh1P48985 Gm13668-201ENSMUST00000119237 1001 ntBASIC13.93□□□□□ -0.18
Atoh1P48985 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC13.93□□□□□ -0.18
Atoh1P48985 Gm4654-201ENSMUST00000183305 982 ntBASIC13.93□□□□□ -0.18
Atoh1P48985 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Atoh1P48985 Gm17877-201ENSMUST00000192578 814 ntBASIC13.93□□□□□ -0.18
Atoh1P48985 AC154257.1-202ENSMUST00000224729 843 ntBASIC13.93□□□□□ -0.18
Atoh1P48985 AC156501.1-201ENSMUST00000228219 270 ntBASIC13.93□□□□□ -0.18
Atoh1P48985 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Atoh1P48985 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Atoh1P48985 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Atoh1P48985 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Atoh1P48985 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Atoh1P48985 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Atoh1P48985 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Atoh1P48985 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Atoh1P48985 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.92□□□□□ -0.18
Atoh1P48985 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Atoh1P48985 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Atoh1P48985 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Atoh1P48985 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.92□□□□□ -0.18
Atoh1P48985 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Atoh1P48985 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Atoh1P48985 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.92□□□□□ -0.18
Atoh1P48985 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Atoh1P48985 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Atoh1P48985 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Atoh1P48985 Gm12164-201ENSMUST00000121695 551 ntBASIC13.92□□□□□ -0.18
Atoh1P48985 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC13.92□□□□□ -0.18
Atoh1P48985 Gm8815-201ENSMUST00000173809 620 ntBASIC13.92□□□□□ -0.18
Atoh1P48985 Gm18159-201ENSMUST00000174516 1070 ntBASIC13.92□□□□□ -0.18
Atoh1P48985 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC13.92□□□□□ -0.18
Atoh1P48985 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Atoh1P48985 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Atoh1P48985 n-R5s211-201ENSMUST00000093689 119 ntBASIC13.92□□□□□ -0.18
Atoh1P48985 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Atoh1P48985 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Atoh1P48985 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Atoh1P48985 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Atoh1P48985 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Atoh1P48985 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Atoh1P48985 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms