Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.59□□□□□ -0.39
Vps4bP46467 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps4bP46467 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps4bP46467 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps4bP46467 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps4bP46467 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps4bP46467 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps4bP46467 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps4bP46467 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps4bP46467 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps4bP46467 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps4bP46467 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps4bP46467 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps4bP46467 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps4bP46467 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps4bP46467 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.59□□□□□ -0.39
Vps4bP46467 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps4bP46467 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps4bP46467 Pck2-205ENSMUST00000226352 2784 ntBASIC12.58□□□□□ -0.39
Vps4bP46467 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.58□□□□□ -0.39
Vps4bP46467 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Vps4bP46467 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Vps4bP46467 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps4bP46467 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps4bP46467 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vps4bP46467 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.58□□□□□ -0.4
Vps4bP46467 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps4bP46467 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vps4bP46467 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vps4bP46467 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Vps4bP46467 Gm11964-201ENSMUST00000120982 444 ntBASIC12.58□□□□□ -0.4
Vps4bP46467 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vps4bP46467 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vps4bP46467 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Vps4bP46467 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.58□□□□□ -0.4
Vps4bP46467 Gm27572-201ENSMUST00000183702 255 ntBASIC12.58□□□□□ -0.4
Vps4bP46467 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.58□□□□□ -0.4
Vps4bP46467 Gm42599-201ENSMUST00000201308 469 ntBASIC12.58□□□□□ -0.4
Vps4bP46467 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.58□□□□□ -0.4
Vps4bP46467 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.58□□□□□ -0.4
Vps4bP46467 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.58□□□□□ -0.4
Vps4bP46467 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
Vps4bP46467 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps4bP46467 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps4bP46467 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps4bP46467 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps4bP46467 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps4bP46467 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps4bP46467 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps4bP46467 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps4bP46467 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vps4bP46467 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Vps4bP46467 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vps4bP46467 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps4bP46467 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps4bP46467 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps4bP46467 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps4bP46467 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps4bP46467 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps4bP46467 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.57□□□□□ -0.4
Vps4bP46467 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.57□□□□□ -0.4
Vps4bP46467 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps4bP46467 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps4bP46467 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps4bP46467 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps4bP46467 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.57□□□□□ -0.4
Vps4bP46467 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Vps4bP46467 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.57□□□□□ -0.4
Vps4bP46467 Gm14660-201ENSMUST00000119809 575 ntBASIC12.57□□□□□ -0.4
Vps4bP46467 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps4bP46467 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.57□□□□□ -0.4
Vps4bP46467 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.57□□□□□ -0.4
Vps4bP46467 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Vps4bP46467 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps4bP46467 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps4bP46467 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Vps4bP46467 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.57□□□□□ -0.4
Vps4bP46467 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps4bP46467 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps4bP46467 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps4bP46467 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Vps4bP46467 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps4bP46467 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps4bP46467 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps4bP46467 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps4bP46467 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps4bP46467 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps4bP46467 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Vps4bP46467 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps4bP46467 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps4bP46467 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.57□□□□□ -0.4
Vps4bP46467 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps4bP46467 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps4bP46467 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps4bP46467 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps4bP46467 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps4bP46467 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Vps4bP46467 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps4bP46467 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps4bP46467 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms