Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC12.05□□□□□ -0.48
Sox18P43680 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Sox18P43680 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.05□□□□□ -0.48
Sox18P43680 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Sox18P43680 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox18P43680 Gm45525-201ENSMUST00000210800 389 ntBASIC12.05□□□□□ -0.48
Sox18P43680 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.05□□□□□ -0.48
Sox18P43680 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.05□□□□□ -0.48
Sox18P43680 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox18P43680 Gm36287-201ENSMUST00000223481 796 ntTSL 5 BASIC12.05□□□□□ -0.48
Sox18P43680 CT030194.1-201ENSMUST00000225507 532 ntBASIC12.05□□□□□ -0.48
Sox18P43680 CT025538.2-201ENSMUST00000226083 772 ntBASIC12.05□□□□□ -0.48
Sox18P43680 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox18P43680 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox18P43680 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox18P43680 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox18P43680 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox18P43680 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.05□□□□□ -0.48
Sox18P43680 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox18P43680 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox18P43680 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox18P43680 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox18P43680 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox18P43680 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox18P43680 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.04□□□□□ -0.48
Sox18P43680 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.04□□□□□ -0.48
Sox18P43680 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Sox18P43680 Gm13615-201ENSMUST00000120242 1612 ntBASIC12.04□□□□□ -0.48
Sox18P43680 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.04□□□□□ -0.48
Sox18P43680 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox18P43680 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.04□□□□□ -0.48
Sox18P43680 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox18P43680 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox18P43680 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox18P43680 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox18P43680 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox18P43680 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox18P43680 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox18P43680 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox18P43680 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox18P43680 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC12.04□□□□□ -0.48
Sox18P43680 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC12.04□□□□□ -0.48
Sox18P43680 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox18P43680 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.04□□□□□ -0.48
Sox18P43680 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox18P43680 Gm23363-201ENSMUST00000175024 79 ntBASIC12.04□□□□□ -0.48
Sox18P43680 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Sox18P43680 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC12.04□□□□□ -0.48
Sox18P43680 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC12.04□□□□□ -0.48
Sox18P43680 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox18P43680 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox18P43680 AC118750.1-201ENSMUST00000214163 675 ntTSL 3 BASIC12.04□□□□□ -0.48
Sox18P43680 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC12.04□□□□□ -0.48
Sox18P43680 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.04□□□□□ -0.48
Sox18P43680 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Sox18P43680 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Sox18P43680 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox18P43680 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.04□□□□□ -0.48
Sox18P43680 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.04□□□□□ -0.48
Sox18P43680 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox18P43680 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox18P43680 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox18P43680 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox18P43680 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox18P43680 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox18P43680 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Sox18P43680 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox18P43680 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.04□□□□□ -0.48
Sox18P43680 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox18P43680 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox18P43680 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox18P43680 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox18P43680 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox18P43680 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox18P43680 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox18P43680 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox18P43680 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox18P43680 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox18P43680 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox18P43680 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox18P43680 Gm28979-201ENSMUST00000190949 1540 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox18P43680 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox18P43680 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Sox18P43680 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.03□□□□□ -0.48
Sox18P43680 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Sox18P43680 Gm23251-201ENSMUST00000103773 110 ntBASIC12.03□□□□□ -0.48
Sox18P43680 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Sox18P43680 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox18P43680 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.03□□□□□ -0.48
Sox18P43680 Gm22588-201ENSMUST00000157510 140 ntBASIC12.03□□□□□ -0.48
Sox18P43680 Gm28071-201ENSMUST00000190355 478 ntBASIC12.03□□□□□ -0.48
Sox18P43680 Gm37631-201ENSMUST00000192275 364 ntBASIC12.03□□□□□ -0.48
Sox18P43680 Gm37905-201ENSMUST00000195310 341 ntBASIC12.03□□□□□ -0.48
Sox18P43680 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox18P43680 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Sox18P43680 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox18P43680 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC12.03□□□□□ -0.48
Sox18P43680 AC139323.1-201ENSMUST00000223370 1040 ntBASIC12.03□□□□□ -0.48
Sox18P43680 AC154595.1-201ENSMUST00000225533 1059 ntBASIC12.03□□□□□ -0.48
Sox18P43680 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms