Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh2P43247 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh2P43247 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh2P43247 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.78□□□□□ -0.36
Msh2P43247 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh2P43247 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh2P43247 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.78□□□□□ -0.36
Msh2P43247 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Msh2P43247 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.78□□□□□ -0.36
Msh2P43247 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh2P43247 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.78□□□□□ -0.36
Msh2P43247 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Msh2P43247 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh2P43247 Gm12384-201ENSMUST00000119228 919 ntBASIC12.78□□□□□ -0.36
Msh2P43247 Gm11637-201ENSMUST00000120601 592 ntBASIC12.78□□□□□ -0.36
Msh2P43247 Gm1335-201ENSMUST00000121653 386 ntBASIC12.78□□□□□ -0.36
Msh2P43247 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Msh2P43247 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Msh2P43247 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.78□□□□□ -0.36
Msh2P43247 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh2P43247 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.78□□□□□ -0.36
Msh2P43247 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Msh2P43247 Gm7029-201ENSMUST00000173226 450 ntBASIC12.78□□□□□ -0.36
Msh2P43247 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Msh2P43247 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh2P43247 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Msh2P43247 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh2P43247 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Msh2P43247 Gm10268-201ENSMUST00000085340 555 ntBASIC12.78□□□□□ -0.36
Msh2P43247 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh2P43247 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.78□□□□□ -0.36
Msh2P43247 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh2P43247 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Msh2P43247 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Msh2P43247 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh2P43247 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh2P43247 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.78□□□□□ -0.36
Msh2P43247 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.78□□□□□ -0.36
Msh2P43247 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh2P43247 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Msh2P43247 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh2P43247 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Msh2P43247 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh2P43247 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh2P43247 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.77□□□□□ -0.36
Msh2P43247 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.77□□□□□ -0.36
Msh2P43247 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.77□□□□□ -0.36
Msh2P43247 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Msh2P43247 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
Msh2P43247 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Msh2P43247 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Msh2P43247 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Msh2P43247 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msh2P43247 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msh2P43247 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Msh2P43247 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.77□□□□□ -0.37
Msh2P43247 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.77□□□□□ -0.37
Msh2P43247 Gm14760-201ENSMUST00000121831 999 ntBASIC12.77□□□□□ -0.37
Msh2P43247 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msh2P43247 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.77□□□□□ -0.37
Msh2P43247 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msh2P43247 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.77□□□□□ -0.37
Msh2P43247 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Msh2P43247 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msh2P43247 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Msh2P43247 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msh2P43247 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.77□□□□□ -0.37
Msh2P43247 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msh2P43247 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Msh2P43247 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Msh2P43247 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msh2P43247 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.77□□□□□ -0.37
Msh2P43247 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msh2P43247 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msh2P43247 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msh2P43247 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msh2P43247 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msh2P43247 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Msh2P43247 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msh2P43247 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Msh2P43247 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msh2P43247 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msh2P43247 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.76□□□□□ -0.37
Msh2P43247 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Msh2P43247 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Msh2P43247 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msh2P43247 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msh2P43247 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Msh2P43247 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msh2P43247 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msh2P43247 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.76□□□□□ -0.37
Msh2P43247 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.76□□□□□ -0.37
Msh2P43247 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msh2P43247 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.76□□□□□ -0.37
Msh2P43247 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Msh2P43247 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Msh2P43247 Gm12291-201ENSMUST00000121627 311 ntBASIC12.76□□□□□ -0.37
Msh2P43247 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.76□□□□□ -0.37
Msh2P43247 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.76□□□□□ -0.37
Msh2P43247 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms