Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk2P38575 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Upk2P38575 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk2P38575 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk2P38575 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk2P38575 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.86□□□□□ -0.67
Upk2P38575 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk2P38575 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk2P38575 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.86□□□□□ -0.67
Upk2P38575 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Upk2P38575 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk2P38575 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk2P38575 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Upk2P38575 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk2P38575 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Upk2P38575 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC10.86□□□□□ -0.67
Upk2P38575 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Upk2P38575 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk2P38575 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Upk2P38575 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk2P38575 Gm13875-201ENSMUST00000120162 282 ntBASIC10.86□□□□□ -0.67
Upk2P38575 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.86□□□□□ -0.67
Upk2P38575 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.86□□□□□ -0.67
Upk2P38575 Gm13570-201ENSMUST00000140763 309 ntBASIC10.86□□□□□ -0.67
Upk2P38575 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Upk2P38575 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Upk2P38575 Mospd4-201ENSMUST00000180618 576 ntBASIC10.86□□□□□ -0.67
Upk2P38575 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Upk2P38575 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.86□□□□□ -0.67
Upk2P38575 Gm4034-201ENSMUST00000187674 480 ntBASIC10.86□□□□□ -0.67
Upk2P38575 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.86□□□□□ -0.67
Upk2P38575 Gm38002-201ENSMUST00000193255 180 ntBASIC10.86□□□□□ -0.67
Upk2P38575 Gm38158-201ENSMUST00000194617 339 ntBASIC10.86□□□□□ -0.67
Upk2P38575 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.86□□□□□ -0.67
Upk2P38575 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.86□□□□□ -0.67
Upk2P38575 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.86□□□□□ -0.67
Upk2P38575 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk2P38575 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk2P38575 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk2P38575 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk2P38575 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk2P38575 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk2P38575 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk2P38575 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Upk2P38575 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.86□□□□□ -0.67
Upk2P38575 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Upk2P38575 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.86□□□□□ -0.67
Upk2P38575 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk2P38575 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk2P38575 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk2P38575 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk2P38575 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.86□□□□□ -0.67
Upk2P38575 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Upk2P38575 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Upk2P38575 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk2P38575 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.85□□□□□ -0.67
Upk2P38575 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk2P38575 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Upk2P38575 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk2P38575 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk2P38575 Gm42748-201ENSMUST00000199354 2341 ntBASIC10.85□□□□□ -0.67
Upk2P38575 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk2P38575 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk2P38575 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk2P38575 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Upk2P38575 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Upk2P38575 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Upk2P38575 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Upk2P38575 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.85□□□□□ -0.67
Upk2P38575 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Upk2P38575 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Upk2P38575 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.85□□□□□ -0.67
Upk2P38575 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.85□□□□□ -0.67
Upk2P38575 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.85□□□□□ -0.67
Upk2P38575 Gm9004-201ENSMUST00000218739 1222 ntBASIC10.85□□□□□ -0.67
Upk2P38575 AC166349.1-201ENSMUST00000220866 695 ntBASIC10.85□□□□□ -0.67
Upk2P38575 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.85□□□□□ -0.67
Upk2P38575 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.85□□□□□ -0.67
Upk2P38575 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk2P38575 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Upk2P38575 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk2P38575 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Upk2P38575 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk2P38575 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk2P38575 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Upk2P38575 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Upk2P38575 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk2P38575 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk2P38575 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk2P38575 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk2P38575 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk2P38575 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk2P38575 Gm45743-201ENSMUST00000212701 2795 ntBASIC10.85□□□□□ -0.67
Upk2P38575 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk2P38575 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk2P38575 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Upk2P38575 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.85□□□□□ -0.67
Upk2P38575 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Upk2P38575 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk2P38575 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms