Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Mmp13P33435 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.69□□□□□ -0.38
Mmp13P33435 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp13P33435 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.69□□□□□ -0.38
Mmp13P33435 Gm22121-201ENSMUST00000175148 54 ntBASIC12.69□□□□□ -0.38
Mmp13P33435 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp13P33435 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.69□□□□□ -0.38
Mmp13P33435 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.69□□□□□ -0.38
Mmp13P33435 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.69□□□□□ -0.38
Mmp13P33435 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp13P33435 Gm19163-201ENSMUST00000223313 780 ntBASIC12.69□□□□□ -0.38
Mmp13P33435 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp13P33435 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp13P33435 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp13P33435 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp13P33435 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Mmp13P33435 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp13P33435 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp13P33435 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.69□□□□□ -0.38
Mmp13P33435 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp13P33435 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp13P33435 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp13P33435 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp13P33435 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp13P33435 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp13P33435 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp13P33435 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp13P33435 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.69□□□□□ -0.38
Mmp13P33435 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp13P33435 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.69□□□□□ -0.38
Mmp13P33435 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp13P33435 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Mmp13P33435 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp13P33435 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp13P33435 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp13P33435 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp13P33435 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp13P33435 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp13P33435 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp13P33435 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp13P33435 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp13P33435 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Mmp13P33435 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp13P33435 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp13P33435 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp13P33435 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp13P33435 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp13P33435 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp13P33435 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp13P33435 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp13P33435 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Mmp13P33435 Gm13392-201ENSMUST00000117708 150 ntBASIC12.68□□□□□ -0.38
Mmp13P33435 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Mmp13P33435 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp13P33435 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Mmp13P33435 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.68□□□□□ -0.38
Mmp13P33435 Gm17208-201ENSMUST00000168388 535 ntBASIC12.68□□□□□ -0.38
Mmp13P33435 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.68□□□□□ -0.38
Mmp13P33435 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp13P33435 Gm27514-201ENSMUST00000183692 110 ntBASIC12.68□□□□□ -0.38
Mmp13P33435 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.68□□□□□ -0.38
Mmp13P33435 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.68□□□□□ -0.38
Mmp13P33435 Gm37008-201ENSMUST00000195712 319 ntBASIC12.68□□□□□ -0.38
Mmp13P33435 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.68□□□□□ -0.38
Mmp13P33435 Gm8099-201ENSMUST00000200510 742 ntBASIC12.68□□□□□ -0.38
Mmp13P33435 Gm8227-201ENSMUST00000223306 571 ntBASIC12.68□□□□□ -0.38
Mmp13P33435 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Mmp13P33435 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Mmp13P33435 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Mmp13P33435 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp13P33435 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp13P33435 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp13P33435 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp13P33435 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp13P33435 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Mmp13P33435 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Mmp13P33435 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.68□□□□□ -0.38
Mmp13P33435 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp13P33435 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp13P33435 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.68□□□□□ -0.38
Mmp13P33435 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp13P33435 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp13P33435 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.68□□□□□ -0.38
Mmp13P33435 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp13P33435 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp13P33435 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp13P33435 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp13P33435 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp13P33435 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp13P33435 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp13P33435 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp13P33435 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp13P33435 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Mmp13P33435 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp13P33435 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp13P33435 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp13P33435 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp13P33435 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Mmp13P33435 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp13P33435 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms