Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14.36□□□□□ -0.11
Pde6aP27664 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.36□□□□□ -0.11
Pde6aP27664 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.36□□□□□ -0.11
Pde6aP27664 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.36□□□□□ -0.11
Pde6aP27664 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6aP27664 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Pde6aP27664 Gm9996-201ENSMUST00000070359 913 ntBASIC14.36□□□□□ -0.11
Pde6aP27664 Gm26232-201ENSMUST00000083360 166 ntBASIC14.36□□□□□ -0.11
Pde6aP27664 Rnu1b6-201ENSMUST00000083839 166 ntBASIC14.36□□□□□ -0.11
Pde6aP27664 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6aP27664 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6aP27664 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6aP27664 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6aP27664 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6aP27664 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.36□□□□□ -0.11
Pde6aP27664 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6aP27664 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6aP27664 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6aP27664 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pde6aP27664 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6aP27664 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6aP27664 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6aP27664 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6aP27664 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC14.35□□□□□ -0.11
Pde6aP27664 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6aP27664 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6aP27664 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6aP27664 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6aP27664 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.35□□□□□ -0.11
Pde6aP27664 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.35□□□□□ -0.11
Pde6aP27664 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6aP27664 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pde6aP27664 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6aP27664 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6aP27664 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.35□□□□□ -0.11
Pde6aP27664 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pde6aP27664 Gm14109-201ENSMUST00000118814 309 ntBASIC14.35□□□□□ -0.11
Pde6aP27664 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14.35□□□□□ -0.11
Pde6aP27664 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6aP27664 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6aP27664 Gm17376-201ENSMUST00000166016 84 ntBASIC14.35□□□□□ -0.11
Pde6aP27664 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pde6aP27664 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.35□□□□□ -0.11
Pde6aP27664 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6aP27664 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.35□□□□□ -0.11
Pde6aP27664 Gm18615-201ENSMUST00000222919 1031 ntBASIC14.35□□□□□ -0.11
Pde6aP27664 Gm10312-201ENSMUST00000078515 489 ntBASIC14.35□□□□□ -0.11
Pde6aP27664 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Pde6aP27664 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6aP27664 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Pde6aP27664 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6aP27664 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6aP27664 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6aP27664 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6aP27664 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6aP27664 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6aP27664 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6aP27664 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6aP27664 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6aP27664 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.34□□□□□ -0.11
Pde6aP27664 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6aP27664 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6aP27664 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pde6aP27664 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Pde6aP27664 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Pde6aP27664 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6aP27664 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6aP27664 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6aP27664 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6aP27664 Gm27046-201ENSMUST00000182160 463 ntBASIC14.34□□□□□ -0.11
Pde6aP27664 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.34□□□□□ -0.11
Pde6aP27664 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6aP27664 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.34□□□□□ -0.11
Pde6aP27664 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6aP27664 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6aP27664 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6aP27664 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6aP27664 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Pde6aP27664 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6aP27664 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6aP27664 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6aP27664 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6aP27664 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.34□□□□□ -0.11
Pde6aP27664 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6aP27664 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6aP27664 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6aP27664 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6aP27664 Gm6015-201ENSMUST00000217493 1586 ntBASIC14.34□□□□□ -0.11
Pde6aP27664 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.34□□□□□ -0.11
Pde6aP27664 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6aP27664 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.33□□□□□ -0.11
Pde6aP27664 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pde6aP27664 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pde6aP27664 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pde6aP27664 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pde6aP27664 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Pde6aP27664 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC14.33□□□□□ -0.11
Pde6aP27664 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6aP27664 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6aP27664 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms